BAC Information

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BAC

Clone NameB6Ng01-349O13
Chromosome16 (Build37)
Map Location 80,021,713 - 80,095,591
singlet/doubletdoublet
Overlap genenone
Upstream genePrss7, EG383172, 1700066C05Rik
Downstream geneLOC621365, LOC100039724
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349O13.bB6Ng01-349O13.g
ACCGA130751GA130752
length1,174306
definitionB6Ng01-349O13.b B6Ng01-349O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,094,400 - 80,095,591)(80,021,713 - 80,022,024)
sequence
gaattcatagtttgacttcttcagtgattatctctgatggtgtaatataa
acaagatattctctttatgcattggattgtttttaataggtgtttcatct
cttagaaaccataccagaaaaatgtatttcctttacctagtattcttttc
ttcccacataggactaattgatatattaaagtaaatattcatagttatta
ttttcagtcaataaattatttctacctgtacaacatatccatatgtactc
ataaagagatatttatgatcaaggaagaatgacatagaaaatttcatata
cttaaaagtaaaaatactataataaaactgaaactttgcaaattgcttgc
ttacatagaaggatgatttaattactaaagtttatgaggtgatatttcat
cctcgtgtattaactgtattagtgaggtctcttctaaggatgagcagaga
acaataaaattatcaattttatcttttgctttaagaattgtaaatacaaa
tgaaaattattttattttattatcaaatattcatatgtgactataaagca
gttttcctttaaattattaaacaaagtgtttctttaaaattccagcttag
ttacaatgttctccaaaatgatgtcattcttgttatactaaccttatgat
ttgataactcaaaaatcatattgaggagcttagcctcactgaaatcagca
tgttatgagggaatgtaatattgtatgtagctgtttttagtagacaaagg
aatgatacttaatttctcttgtgtggcaatagataagagaaaacattgat
ggtttatcacatttagaagtaattaaaaacttacaatcctgtccattttt
gaacaagcaggaatcgacatctgggaagaaatatataacatgagagaatg
aaaaacgtaaacatgactgcttcattaaatgttattgaattattgtatat
cccttattgtattaatgtgtctaagtaatgtgaatggaaagaaaatacta
aatgtgatagttgataggatactccttactactttaatttacaatgcata
gtatgtataggttcatcgtctggtggcatttattcatatatgtcagtgtc
tttgttcaagtgatactctgtctaatccctcaattgcatttctgcttttg
accttcaatctatttctacatctg

ttcagaaagaaggaagtgatcctttgattttcactttcagacacaaattt
ccatcattctgatctataaagctgaccaagagaccatttgttttgctcta
atttgtcacatgtattagggacaggaacctaaacaacatgaacaaagaaa
caaacatatatgtacatacacatttgaaatcaccagaatatattttaaaa
gtaacaatttatgtttttgtgcttcatcaagtacattaaatgctccccca
gcactaactctctctctctctctctctctctctctctctctctctctctc
tctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80094400_80095591
seq2: B6Ng01-349O13.b_50_1223 (reverse)

seq1  CAGATGTAGAAATAGGATTGGAAGATTCCAAAAAGCAGAATAGGAAATAT  50
      |||||||||||||| |||| |||| |    ||||||||||  | ||    
seq2  CAGATGTAGAAATA-GATT-GAAGGT---CAAAAGCAGAAATGCAA----  41

seq1  TGGAGGGAATAGGACAGAGTTATCACTTTGAACAAAGGACACTGACATAT  100
      | |||||| || ||||||| |||||| ||||||||| |||||||||||||
seq2  TTGAGGGATTA-GACAGAG-TATCAC-TTGAACAAA-GACACTGACATAT  87

seq1  ATGGATTAAAATGCCA-CAGACGATGAAACCTATACATACTATGCATGTA  149
      ||| ||  |||||||| ||||||||| ||||||||||||||||||||   
seq2  ATGAAT--AAATGCCACCAGACGATG-AACCTATACATACTATGCATTGT  134

seq1  AAATTAAAAGTTAGTAAGGAAGTATTCCTATCAACTATCACATTTAGTAT  199
      ||||||||   |||||||| |||| |||||||||||||||||||||||||
seq2  AAATTAAA--GTAGTAAGG-AGTA-TCCTATCAACTATCACATTTAGTAT  180

seq1  TTTCTTTCCATTCACATTACTTAGACACATTAATACAATAA-GGATATAC  248
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTCTTTCCATTCACATTACTTAGACACATTAATACAATAAGGGATATAC  230

seq1  AATAATTCAATAACATTTAATGAAGCAGTCATGTTTACGTTTTTCATTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCAATAACATTTAATGAAGCAGTCATGTTTACGTTTTTCATTCT  280

seq1  CTCATGTTATATATTTCTTCCCAGATGTCGATTCCTGCTTGTTCAAAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTATATATTTCTTCCCAGATGTCGATTCCTGCTTGTTCAAAAAT  330

seq1  GGACAGGATTGTAAGTTTTTAATTACTTCTAAATGTGATAAACCATCAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGATTGTAAGTTTTTAATTACTTCTAAATGTGATAAACCATCAAT  380

seq1  GTTTTCTCTTATCTATTGCCACACAAGAGAAATTAAGTATCATTCCTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCTTATCTATTGCCACACAAGAGAAATTAAGTATCATTCCTTTG  430

seq1  TCTACTAAAAACAGCTACATACAATATTACATTCCCTCATAACATGCTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAAAAACAGCTACATACAATATTACATTCCCTCATAACATGCTGA  480

seq1  TTTCAGTGAGGCTAAGCTCCTCAATATGATTTTTGAGTTATCAAATCATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGAGGCTAAGCTCCTCAATATGATTTTTGAGTTATCAAATCATA  530

seq1  AGGTTAGTATAACAAGAATGACATCATTTTGGAGAACATTGTAACTAAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGTATAACAAGAATGACATCATTTTGGAGAACATTGTAACTAAGC  580

seq1  TGGAATTTTAAAGAAACACTTTGTTTAATAATTTAAAGGAAAACTGCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTTAAAGAAACACTTTGTTTAATAATTTAAAGGAAAACTGCTTT  630

seq1  ATAGTCACATATGAATATTTGATAATAAAATAAAATAATTTTCATTTGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCACATATGAATATTTGATAATAAAATAAAATAATTTTCATTTGTA  680

seq1  TTTACAATTCTTAAAGCAAAAGATAAAATTGATAATTTTATTGTTCTCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATTCTTAAAGCAAAAGATAAAATTGATAATTTTATTGTTCTCTG  730

seq1  CTCATCCTTAGAAGAGACCTCACTAATACAGTTAATACACGAGGATGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTTAGAAGAGACCTCACTAATACAGTTAATACACGAGGATGAAA  780

seq1  TATCACCTCATAAACTTTAGTAATTAAATCATCCTTCTATGTAAGCAAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCTCATAAACTTTAGTAATTAAATCATCCTTCTATGTAAGCAAGC  830

seq1  AATTTGCAAAGTTTCAGTTTTATTATAGTATTTTTACTTTTAAGTATATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAAAGTTTCAGTTTTATTATAGTATTTTTACTTTTAAGTATATG  880

seq1  AAATTTTCTATGTCATTCTTCCTTGATCATAAATATCTCTTTATGAGTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTATGTCATTCTTCCTTGATCATAAATATCTCTTTATGAGTAC  930

seq1  ATATGGATATGTTGTACAGGTAGAAATAATTTATTGACTGAAAATAATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATATGTTGTACAGGTAGAAATAATTTATTGACTGAAAATAATAA  980

seq1  CTATGAATATTTACTTTAATATATCAATTAGTCCTATGTGGGAAGAAAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATATTTACTTTAATATATCAATTAGTCCTATGTGGGAAGAAAAG  1030

seq1  AATACTAGGTAAAGGAAATACATTTTTCTGGTATGGTTTCTAAGAGATGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAGGTAAAGGAAATACATTTTTCTGGTATGGTTTCTAAGAGATGA  1080

seq1  AACACCTATTAAAAACAATCCAATGCATAAAGAGAATATCTTGTTTATAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTATTAAAAACAATCCAATGCATAAAGAGAATATCTTGTTTATAT  1130

seq1  TACACCATCAGAGATAATCACTGAAGAAGTCAAACTATGAATTC  1192
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCATCAGAGATAATCACTGAAGAAGTCAAACTATGAATTC  1174


seq1: chr16_80021713_80022024
seq2: B6Ng01-349O13.g_67_378

seq1  GAATTCTTCAGAAAGAAGGAAGTGATCCTTTGATTTTCACTTTCAGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAAAGAAGGAAGTGATCCTTTGATTTTCACTTTCAGACAC  50

seq1  AAATTTCCATCATTCTGATCTATAAAGCTGACCAAGAGACCATTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCATCATTCTGATCTATAAAGCTGACCAAGAGACCATTTGTTTT  100

seq1  GCTCTAATTTGTCACATGTATTAGGGACAGGAACCTAAACAACATGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAATTTGTCACATGTATTAGGGACAGGAACCTAAACAACATGAACA  150

seq1  AAGAAACAAACATATATGTACATACACATTTGAAATCACCAGAATATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAACATATATGTACATACACATTTGAAATCACCAGAATATATT  200

seq1  TTAAAAGTAACAATTTATGTTTTTGTGCTTCATCAAGTACATTAAATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTAACAATTTATGTTTTTGTGCTTCATCAAGTACATTAAATGCT  250

seq1  CCCCCAGCACTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGCACTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300

seq1  TCTCTCTCTCTC  312
      ||||||||||||
seq2  TCTCTCTCTCTC  312


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