Query= MSMg01no045_a05.b1 MSMg01no045_a05.b1 CHROMAT_FILE:
MSMg01no045_a05.b1 PHD_FILE: MSMg01no045_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:51 2005
(148 letters)
>mm_chr16_77727867_77728410
Length = 544
Score = 236 bits (122), Expect = 5e-67
Identities = 137/142 (96%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 3 gaattctttagtattcgctgcctagttttcatcatccaattcactttcatcttacaagaa 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctttagtattctctgcctagttttcatcatccaattcactttcatcttacaagaa 262
Query: 63 aattacttggggtcaaaagtcatagcatttaagtctctaggtatattatcgagaagcaaa 122
||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 263 aattacttggg-tcaaaagtcatagc-tttaagtctctaggtatattat-gagaagcaaa 319
Query: 123 atgctaagcatgaaaagccatt 144
||||||||| ||||||||||||
Sbjct: 320 atgctaagc-tgaaaagccatt 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 544
Length adjustment: 8
Effective length of query: 140
Effective length of database: 536
Effective search space: 75040
Effective search space used: 75040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no045_a05.g1 MSMg01no045_a05.g1 CHROMAT_FILE:
MSMg01no045_a05.g1 PHD_FILE: MSMg01no045_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:51 2005
(203 letters)
>mm_chr16_77856064_77856666
Length = 603
Score = 358 bits (185), Expect = e-103
Identities = 198/203 (97%), Gaps = 2/203 (0%)
Strand = Plus / Minus
Query: 1 gaatgaatgatggaagaaagaatagtgcccagacaagttgtcattaaaaaaaatagtaaa 60
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 482 gaatgaatgatggaagaaagaatagtgccaagacaagttgtcatt--aaaaaatagtaaa 425
Query: 61 atatttaaaaaattaattaatgaggctgaaacataaagaatatttctcaatttagtacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atatttaaaaaattaattaatgaggctgaaacataaagaatatttctcaatttagtacaa 365
Query: 121 gaaagtgtgaatataaaaaaacagccattttctagaaactctgattatctctacctatgt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 364 gaaagtgtgaatataaaaaaacagccattttctagcaactctgattatctctatctatgt 305
Query: 181 tcagaaaatctttgatatttaga 203
|||||||||||||||||||||||
Sbjct: 304 tcagaaaatctttgatatttaga 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
