Query= MSMg01no046_p04.b1 MSMg01no046_p04.b1 CHROMAT_FILE:
MSMg01no046_p04.b1 PHD_FILE: MSMg01no046_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:12 2005
(645 letters)
>mm_chr16_34749193_34750238
Length = 1046
Score = 1145 bits (592), Expect = 0.0
Identities = 630/643 (97%), Gaps = 3/643 (0%)
Strand = Plus / Minus
Query: 5 gaattctctctcattattttcgattc-ncataaaattgaattcacgcctggaatactctg 63
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 846 gaattccctctcattattttcgattcagcataaaattgaattcacgcctggaatactctg 787
Query: 64 ggcagaaagaaaacaagcccagaaatgaaaatcattcaggaaataaatctcaggagaagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggcagaaagaaaacaagcccagaaatgaaaatcattcaggaaataaatctcaggagaagc 727
Query: 124 agacaggcatggctgggggaacagcacggggtcaaaggtgtcccgccaggtgccagctga 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 726 agacaggcatggctgggggaacagcacggggtcaaaggtgtcccaccaggtgccagctga 667
Query: 184 gaaggggctgagccctttcagacatggagccaagagttcctggccctctctcccagcaca 243
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaaggggctgagcccttgcagacatggagccaagagttcctggccctctctcccagcaca 607
Query: 244 ca-cacccctgctctcttcctgtgtctgaagccttccccaccacagcaggccctgagctt 302
|| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 606 catc-cccctgctctcttcctgtgtctgaggccttccccaccacagcaggccctgagctt 548
Query: 303 cttgctgctttgcacacttttaagttctgcgtcgttcctgttttttttttacttcactca 362
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||
Sbjct: 547 cttgctgctttgcacacttttaagttctgcgtcattcctgttttctttttacttcattca 488
Query: 363 tggcaactgtgtcctcatacagacccaagtctagaagggctaagacccttggctttatgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tggcaactgtgtcctcatacagacccaagtctagaagggctaagacccttggctttatgc 428
Query: 423 tcatccacacaacatagtggagagtaggtagctaattatgtttgctggctcatttatagt 482
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcatccacacaacgtagtggagagtaggtagctaattatgtttgctggctcatttatagt 368
Query: 483 tattccatgggcatgatgaatgctgtgactcagtaggttataataatgatttccctattt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tattccatgggcatgatgaatgctgtgactcagtaggttataataatgatttccctattt 308
Query: 543 tccacccggtagttaagcatgtatgtatggatgaacacgaactggcatgcatgcatatat 602
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tccatccggtagttaagcatgtatgtatggatgaacacgaactggcatgcatgcatatat 248
Query: 603 gtggaagctaaaagtcaactctaggtgtctcttctcaggagcc 645
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtggaagctaaaagtcaactctaggtgtctcttctcaggagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space: 657860
Effective search space used: 657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_p04.g1 MSMg01no046_p04.g1 CHROMAT_FILE:
MSMg01no046_p04.g1 PHD_FILE: MSMg01no046_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:13 2005
(609 letters)
>mm_chr16_34555098_34556106
Length = 1009
Score = 1154 bits (597), Expect = 0.0
Identities = 606/609 (99%)
Strand = Plus / Plus
Query: 1 aaattctgaatccagaaaacagaaccccccagaactcactgcatatctccacaccctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattctgaatccagaaaacagaaccccccagaactcactgcatatctccacaccctttc 260
Query: 61 accctgccgcttccagttctccctcaccttcacacgactttctggctctgctacattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accctgccgcttccagttctccctcaccttcacacgactttctggctctgctacattttc 320
Query: 121 cctctgcttagaacccctttcccacgctagacacttcccagtcatcactcttgacaatgg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 cctctgcttagaacccctttcccatgctagacacttcccagtcatcactcttgacaatgg 380
Query: 181 gtctctcttcccaatgccattcatatatatcctactctatgaccattccacaaaagtccc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctctcttcccaatgccattcacatatatcctactctatgaccattccacaaaagtccc 440
Query: 241 accaggctttaccactctttagctctatggtaaacatgggacgatataatgcactttaaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accagcctttaccactctttagctctatggtaaacatgggacgatataatgcactttaaa 500
Query: 301 aagtaactcattgccctccaccaaaatgtcagttttcagaagatgcaggaaatgtggggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtaactcattgccctccaccaaaatgtcagttttcagaagatgcaggaaatgtggggt 560
Query: 361 aaggagatgaagttctgtgtgagagaaagcaagccaagatggtagtttgcttaccctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggagatgaagttctgtgtgagagaaagcaagccaagatggtagtttgcttaccctgat 620
Query: 421 tgtcttgttgaggatgttgctgagctgagtttacacatgccctggggagagatggtttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcttgttgaggatgttgctgagctgagtttacacatgccctggggagagatggtttct 680
Query: 481 ttatcttcactgccctcactctctgactccaggaagagttcaaggatatgctttacaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatcttcactgccctcactctctgactccaggaagagttcaaggatatgctttacaaga 740
Query: 541 ggatcagtaagtcagtcctcttcataccttgggagagctggcggtccccaaggatgacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggatcagtaagtcagtcctcttcataccttgggagagctggcggtccccaaggatgacat 800
Query: 601 tatctagag 609
|||||||||
Sbjct: 801 tatctagag 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
