Query= MSMg01no049_c09.b1 MSMg01no049_c09.b1 CHROMAT_FILE:
MSMg01no049_c09.b1 PHD_FILE: MSMg01no049_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:10:51 2005
(414 letters)
>mm_chr16_67349966_67350779
Length = 814
Score = 762 bits (394), Expect = 0.0
Identities = 409/414 (98%)
Strand = Plus / Plus
Query: 1 atatggagagacaatgatttaactgaatattaggaaagggttctgaaaataaagtctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatggagagacaatgatttaactgaatattaggaaagggttctgaaaataaagtctgaa 260
Query: 61 gtaggcagagcctcggacatataagtggcatcctaaagatgacattaccagttttaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaggcagagcctcggacatataagtggcatcctaaagatgacattaccagttttaacat 320
Query: 121 atcattgagtgttctaacaaaagtgtcataatcaaattataagatactcagttattgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcattgagtgttctaacaaaagtgtcataatcaaattataagatactcagttattgtca 380
Query: 181 atagcatatgttattgtagaggtagtaagagctcagtgagagttttatcaaattatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagcatatgttattgtagaggtagtaagagctcagtgagagttttatcaaattatacac 440
Query: 241 ttagattgacataattatgatatctcgttctggatagcatgtttgcttcttccttttctt 300
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 441 ttagattgacataattatgatatctcgttctggatagcatgttggtttcttccttttctt 500
Query: 301 cattccaagtttatacctctggaaacattggaatgctgatgtcattagtttaatcatatg 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 cattccaagtttatacctctggaaacattggaatgctgatgttattagtttaatcatatg 560
Query: 361 tgtaaggtagagcaaaaaaaaacaaaaaggaaacagcaagcatttggcacatag 414
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 561 tgtaaggtagagcaaaaaaaaaaaaaaaggaaacagcaagcatttgggacatag 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_c09.g1 MSMg01no049_c09.g1 CHROMAT_FILE:
MSMg01no049_c09.g1 PHD_FILE: MSMg01no049_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:10:51 2005
(665 letters)
>mm_chr16_67442286_67443350
Length = 1065
Score = 822 bits (425), Expect = 0.0
Identities = 476/499 (95%), Gaps = 11/499 (2%)
Strand = Plus / Minus
Query: 177 aaggaaagaagagaagagaaaagaaaagaagagaagagaagagaagagaagagaagagaa 236
|||||||||| ||||||||||||||||||| |||| |||||||||||||| |||| ||||
Sbjct: 1061 aaggaaagaaaagaagagaaaagaaaagaaaagaaaagaagagaagagaaaagaaaagaa 1002
Query: 237 aagaaaagaag----------agaaaagaaaagaaaagaaaaagtaggacagcaaaaaaa 286
||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 1001 aagaaaagaagagaagagaaaagaaaagaaaagaaaagaaaaaacaggacagc-aaaaaa 943
Query: 287 attcaataataaaagaacttctgggggaatcaccatttctgaactcaagctgtactacag 346
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tttcaataataaaagaacttctgggggaatcaccatttctgaactcaagctgtactacag 883
Query: 347 agcaatactgataaaaagaatatacatctctattcatgacacttggtctatgaagaagca 406
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 agtaatactgataaaaagaatatacatctctattcatgacacttggtctatgaagaagca 823
Query: 407 gcagctagggagcataaagaaagtaaaaaatcacaccagtatattattagagtacacaat 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gcagctagggagcataaagaaagtaaaaaatcacaccagtatattattagagtacacaat 763
Query: 467 tttatcaagtcaaattagcattgtaaacaaaactattcacattttatcaaactagtgatt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tttatcaagtcaaattagcattgtaaacaaaactattcacattttatcaaactagtgatt 703
Query: 527 tattttttatgtcaccaccttttgctacttgtatgaaatctttgcacttgccgtggttgg 586
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 702 tattttttatgtcaccaccttttgctacttgtatgaaatctttgcacttgcagtggttgg 643
Query: 587 catgacattaaatataatgttttacatgtagtttagataaaacccatacaaatatactta 646
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 642 catgacattaaatataatgttttacatgtagtttagataaaacatatacaaatatactta 583
Query: 647 aactagtttattttaaata 665
|||||||||||||||||||
Sbjct: 582 aactagtttattttaaata 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
