Query= MSMg01no050_g23.b1 MSMg01no050_g23.b1 CHROMAT_FILE:
MSMg01no050_g23.b1 PHD_FILE: MSMg01no050_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:44 2005
(605 letters)
>mm_chr16_70451758_70452762
Length = 1005
Score = 1108 bits (573), Expect = 0.0
Identities = 597/605 (98%), Gaps = 1/605 (0%)
Strand = Plus / Minus
Query: 1 gaaactctaaccaaattacatgccacattagcaatgttttctccacaactgctaccataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaaactctaaccaaattacatgccacattagcaatgttttctccacaactgctaccataa 554
Query: 61 tttccctatgattctatcatatttataaaatgtaaataaataattggtgtttaaaattca 120
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 553 tttccctatgattctatcatatttataaaacgtaaataaataataggtgtttaaaattca 494
Query: 121 taaacatcatttttcattatttatctaggctacatatcccctcaatgaaatcccgaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 taaacatcatttttcattatttatctaggctacatatcccctcaatgaaatcccgaactt 434
Query: 181 tttaaatatgcatgacggagaacaagtgccgtactatgacttgaagcagagtatgttggt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 433 tttaaatatgcatgacggagaacaagtgccgtactatgacttgaagcggagtatgttggt 374
Query: 241 aaattatttatttcatgtttaaccataatgactgaatcattctttctaaatcacagatgt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 373 aaattatttatttcatgtttaaccagaatgactgaatcattctttctaaatcacagatgt 314
Query: 301 ctgggtcatttgccagagaaaaaaacagaatgccaaaacaattaaatttatatgtttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgggtcatttgccagagaaaaaaacagaatgccaaaacaattaaatttatatgtttgct 254
Query: 361 gactgacaaattggtgttttctaggctggctgttctataaaactgctgcaggcaaagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 253 gactgacaaattggtgttttctaggctggctgttctataaaactgctgcaggctaagggt 194
Query: 421 taataaatgtcagtggacattttgttcacgttctatgttcatcatcaatttcctgagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 taataaatgtcagtggacattttgttcacgttctatgttcatcatcaatttcctgagaaa 134
Query: 481 ttgaaatttagtgttttataaagcacatactttcatgctctgagtccacagctactaaat 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 133 ttgaaatttagtgttttataaagcacgtactttcatgctctgagtccacagctactaaat 74
Query: 541 ttattgaaaaataaaatggcattttcattccactagctcaataaattgatgggtatttac 600
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 73 ttattgaaaaataaaatggca-tttcattcaactagctcaataaattgatgggtatttac 15
Query: 601 ccaat 605
|||||
Sbjct: 14 ccaat 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_g23.g1 MSMg01no050_g23.g1 CHROMAT_FILE:
MSMg01no050_g23.g1 PHD_FILE: MSMg01no050_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:44 2005
(372 letters)
>mm_chr16_70321891_70322662
Length = 772
Score = 688 bits (356), Expect = 0.0
Identities = 368/372 (98%)
Strand = Plus / Plus
Query: 1 ttttatgttcaataaacaaagccctgcttcattttgtgttaggggtaacagagacctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttatgttcaataaacaaagccctgcttcattttgtgttaggggtaacagagacctgga 260
Query: 61 gcttcaacaaaaagaagacattaaatatgtagttttataatttacatttattgatttatt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttcaacaaaaggaagacattaaatatgtagttttataatttacatttattgatttatt 320
Query: 121 taataatttcattgtatattctctgctactgtgtagctatggcaactaacttgtaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taataatttcattgtatattctctgctactgtgtagctatggcaactaacttgtaaaact 380
Query: 181 tgattttatttttatttttgtgtgtgtgattaatggtttcatctaaaccttgtttttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgattttatttttatttttgtgtgtgtgattaatggtttcatctaaaccttgtttttttc 440
Query: 241 ccaaggcaaaaaattaattaaaatatattgctctctacctcttctaccttcccctgtccc 300
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaggtaaaaaattaactaaaatatattgctctctacctcttctaccttcccctgtccc 500
Query: 301 tcactccctcttaaattcatggcctcttatcttaaaattatcatgttttacacacacaca 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 tcactccctcttaaattcatggcctcttatattaaaattatcatgttttacacacacaca 560
Query: 361 cacacacacaca 372
||||||||||||
Sbjct: 561 cacacacacaca 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
