Query= MSMg01no051_g01.b1 MSMg01no051_g01.b1 CHROMAT_FILE:
MSMg01no051_g01.b1 PHD_FILE: MSMg01no051_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:58 2005
(364 letters)
>mm_chr16_72960065_72960829
Length = 765
Score = 592 bits (306), Expect = e-173
Identities = 342/354 (96%), Gaps = 1/354 (0%)
Strand = Plus / Minus
Query: 12 gaattcaaacggggacccctctctctttcctctttattctaaatatttctggggtttttg 71
||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 565 gaattcatacggggacccctctctctttcctcttcattctaaatatttctgggatttttg 506
Query: 72 actaatccatttcttgctcatgccaccggtgtctcatttcacgatacttggatttttgtt 131
|||||||||||||||||||||| | ||||||||||||||| |||||||||||||| ||
Sbjct: 505 actaatccatttcttgctcatgtgattggtgtctcatttcacaatacttggatttttctt 446
Query: 132 tgcagataactaatacctgtattttctgttt-aaaaaaaaaggtagaaaatggttatacc 190
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 tgcagataactaatacccgtattttctgtttaaaaaaaaaaggtagaaaatggttatacc 386
Query: 191 tgactcccctctctcctccaaaagatagctggttgaggatttccagttgcttcgcactga 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgactcccctctctcctccaaaagatagctggttgaggatttccagttgcttcgcactga 326
Query: 251 aacgtcacagttcttcccaaggcaaccacctggtcccgaggttttacaacgaaatgtggc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacgtcacagttcttcccaaggcaaccacctggtcccgaggttttacaacgaaatgtggc 266
Query: 311 ggctctagagaaacgaaacacagggaatcagatcatggcaccacagtccctaca 364
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggctctagagaaatgaaacacagggaatcagatcatggcaccacagtccctaca 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 765
Length adjustment: 9
Effective length of query: 355
Effective length of database: 756
Effective search space: 268380
Effective search space used: 268380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_g01.g1 MSMg01no051_g01.g1 CHROMAT_FILE:
MSMg01no051_g01.g1 PHD_FILE: MSMg01no051_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:58 2005
(315 letters)
>mm_chr16_72946158_72946870
Length = 713
Score = 497 bits (257), Expect = e-145
Identities = 296/309 (95%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 7 taggggggatgtatctttgttgtatgcaaacatgaaccctttttataagaatttcaccgc 66
|||||||| ||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 207 tagggggg-tgtatctttgttgtatgcaaacatgaaaccattttataagaatttcaatgc 265
Query: 67 ctttagattttgatgtccacagggcttgtgaaactaatgccataatatattgatcactgc 126
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 266 ctttagattttgatgtccacagggctcgtgaaaccaatgccataatatattgatcactgc 325
Query: 127 ttgggtggataaatccctggcaataattgtcatagaatttagccttaaaatttggatcaa 186
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 ttgggtggat-aatccctggcaataattgacatagaatttagccttaaaatttggatcaa 384
Query: 187 gcggtatcttccattacaagagatgagcatccctgtacttagtcattttctaatataaaa 246
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcggtatcttccattagaagagatgagcatccctgtacttagtcattttctaatataaaa 444
Query: 247 gttacccttttgacaataagataatttgggttttctatcgtgtcatggttacatgtggcc 306
||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||
Sbjct: 445 gttacccttttgacaataagataatatgggttttctatcatgtcgtggttacatgtggcc 504
Query: 307 ctttgagag 315
|||||||||
Sbjct: 505 ctttgagag 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 713
Length adjustment: 9
Effective length of query: 306
Effective length of database: 704
Effective search space: 215424
Effective search space used: 215424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|