Query= MSMg01no053_c05.b1 MSMg01no053_c05.b1 CHROMAT_FILE:
MSMg01no053_c05.b1 PHD_FILE: MSMg01no053_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:58 2005
(184 letters)
>mm_chr16_56827361_56827944
Length = 584
Score = 300 bits (155), Expect = 4e-86
Identities = 176/183 (96%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 1 gcctatacatcctctgccccccccctcttctttttgggaaaggaattttgtatgatttaa 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctatatatcctctgccccccccctcttctttttgggaaaggaattttgtatgatttaa 260
Query: 61 tgatcttgatacattttgttccttcttaatataataaacttgtttgtaggagtgtctaga 120
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 261 tgatcttgatacattttgttccttcttaatataataaacgtgtttgtaagagtgtctaga 320
Query: 121 atcttaacattctggattaaaattaaaagttttaaaattaaaaaaaaaagttttgaaatt 180
||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 321 atcttaagactctggattaaaattaaaagttttaaaatttaaaaaaaa-gttttgaaatt 379
Query: 181 taa 183
|||
Sbjct: 380 taa 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_c05.g1 MSMg01no053_c05.g1 CHROMAT_FILE:
MSMg01no053_c05.g1 PHD_FILE: MSMg01no053_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:58 2005
(100 letters)
>mm_chr5_131286045_131286544
Length = 500
Score = 163 bits (84), Expect = 4e-45
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 1 gggaagacctcacggtgggcggcctgtggtgtgcctcgggctttgcccttttagtggcct 60
|||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gggaagacctcagggtgggaggcctgtggtgtgcctcgggctttgtccttttagtggcct 260
Query: 61 ggctttcatcttgttgagaattcataatttctctgcagcc 100
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ggctttcatcttgttgagaattcagaatttctctgcagcc 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 100
Length of database: 500
Length adjustment: 8
Effective length of query: 92
Effective length of database: 492
Effective search space: 45264
Effective search space used: 45264
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
