Query= MSMg01no056_d13.b1 MSMg01no056_d13.b1 CHROMAT_FILE:
MSMg01no056_d13.b1 PHD_FILE: MSMg01no056_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:49 2005
(440 letters)
>mm_chr16_33404960_33405799
Length = 840
Score = 704 bits (364), Expect = 0.0
Identities = 402/418 (96%), Gaps = 6/418 (1%)
Strand = Plus / Plus
Query: 23 ttctacttaagaccttttgtttgttttgtttttgtttttgtttttggagaccccgtttct 82
||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 229 ttctacttaagaccttttgtttg------ttttgtttttgtttttggagactgggtttct 282
Query: 83 ctatgtagtcctggaacttacagaccaagctgaccttgaactcttagagactcacctgaa 142
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctatgtagccctggaacttatagaccaagctgaccttgaactcttagagactcacctgaa 342
Query: 143 tgcctggcttaaaggtgcaagtcaccacctgcctatttaagacttttgttagatgagctt 202
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 343 cgcctggcttaaaggtgcaagtcaccacctgtctatttaagacttttgttagatgagctt 402
Query: 203 tacagattctttctttaagtctataagcagagtagactgcttttaaaaatgatcttagaa 262
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tacggatactttctttaagtctataagcagagtagactgcttttaaaaatgatcttagaa 462
Query: 263 atgtcatcttgacaaggtctttaatttggggatcagatctgatttattttcattcatgga 322
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 463 atgtcatcttgacaaggtctttaatttgggtatcagatctgatttattttcattcatgga 522
Query: 323 gggtagcacacctctggtgccaaggtctgtagtcctttgcttcagttctcaagaagttct 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gggtagcacacctctggtgccaaggtctgtagtcctttgcttcagttctcaagaagttct 582
Query: 383 ttgtatcatatttaaattcatgatcccttctgactttgagacatggttgtatggctta 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttgtatcatatttaaattcatgatcccttctgactttgagacatggttgtatggctta 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_d13.g1 MSMg01no056_d13.g1 CHROMAT_FILE:
MSMg01no056_d13.g1 PHD_FILE: MSMg01no056_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:49 2005
(293 letters)
>mm_chr16_33504641_33505333
Length = 693
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%)
Strand = Plus / Minus
Query: 1 attcaacctcaagtgtgcagcacagtaccaacacatccttacactcagggcccgccttaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 337 attcaacctcaagtgtgcagcacagtaccaacacatccttacactcagggtttgccttaa 278
Query: 61 ccataccaagtacaacactgtgacatgtaatctgttgctgataccacaatgctttcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ccataccaagtacaacactgtgacatgtaatctgttgctgataccacaatgctttcagat 218
Query: 121 taagatgctagcagccaagctggctcaatggctaaatagccctggctgctcttccagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 taagatgctagcagccaagctggctcaatggctaaatagccctggctgctcttccagagg 158
Query: 181 atccgggtttgattcctgccacacaagcccctgtactggcagctgcagaggattgggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atccgggtttgattcctgccacacaagcccctgtactggcagctgcagaggattgggtgc 98
Query: 241 cctcttcggtgcttgctcagctctcactcacatggtacacagacacatatgt 292
||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cctcttcagtgcttgctcagctctcactcacatggtacacagacacatatgt 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
