Query= MSMg01no057_e09.b1 MSMg01no057_e09.b1 CHROMAT_FILE:
MSMg01no057_e09.b1 PHD_FILE: MSMg01no057_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:10 2005
(440 letters)
>mm_chr16_88406080_88406919
Length = 840
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Minus
Query: 1 aatcacattctacagcacaaatgaagaaatgcgatgcatgagactggagggtgatgttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aatcacattctacagcacaaatgaagaaatgcgatgcatgagactggagggtgatgttag 281
Query: 61 actattctctaaagaacaggagacatttaccttagacaatgtagacagtgtcactttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 actattctctaaagaacaggagacatttaccttagacaatgtagacagtgtcactttttt 221
Query: 121 tttccatcattactttcctgtatttttttttaattttttaatcattttttaaagtacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tttccatcattactttcctgtatttttttttaattttttaatcattttttaaagtacaga 161
Query: 181 ctttatccacctcctggtccaccctctgactgttccacatcccttacctcctctctgcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ctttatccacctcctggtccaccctctgactgttccacatcccttacctcctctctgcta 101
Query: 241 ccctcctccatctccaagaggatgtccttgccccccacccacacttccaccacaccagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ccctcctccatctccaagaggatgtccttgccccccacccacacttccaccacaccagac 41
Query: 301 cttcccaatccctgcggcctcaagttttttgagagttagg 340
|||||||||||||||||||| |||||| ||||||||||||
Sbjct: 40 cttcccaatccctgcggcctaaagtttcttgagagttagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_e09.g1 MSMg01no057_e09.g1 CHROMAT_FILE:
MSMg01no057_e09.g1 PHD_FILE: MSMg01no057_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:10 2005
(346 letters)
>mm_chr16_88280360_88281106
Length = 747
Score = 640 bits (331), Expect = 0.0
Identities = 343/347 (98%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 1 attcaatcccctccctctcattaccattggaaggtcgggagcaaggctggaggaagatgg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 attcaatcccctccctctcattaccattggaaggtcgggggcaaggctggaggaagatgg 260
Query: 61 agcacagcctctgtttttaaggtgaggccatctgatgtccagtgagggatgagcgcaggg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcacagcctccgtttttaaggtgaggccatctgatgtccagtgagggatgagcgcaggg 320
Query: 121 acacaatgtagttagatgtcaacaccaagacagggatcaaactggaggaaactggtctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacaatgtagttagatgtcaacaccaagacagggatcaaactggaggaaactggtctca 380
Query: 181 tgtacagcctgaaggaatgtgtgatctttagagaactttaatctccatagggagaaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtacagcctgaaggaatgtgtgatctttagagaactttaatctccatagggagaaagaa 440
Query: 241 gaaaagatatttgtataaatatgcatttaaagttgacagtgagcaatttgatatgaccc- 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaagatatttgtataaatatgcatttaaagttgacagtgagcaatttgatatgacccc 500
Query: 300 actggaattttgggctcttgtgcctagttaagtttaatgacagataa 346
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtggaattttgggctcttgtgcctagttaagtttaatgacagataa 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
