Query= MSMg01no059_a02.b1 MSMg01no059_a02.b1 CHROMAT_FILE:
MSMg01no059_a02.b1 PHD_FILE: MSMg01no059_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:24 2005
(534 letters)
>mm_chr16_41646018_41646951
Length = 934
Score = 1002 bits (518), Expect = 0.0
Identities = 531/536 (99%), Gaps = 2/536 (0%)
Strand = Plus / Plus
Query: 1 tgttttgttttgttttgtttttaaattttctttctcctccctcttgatcactctacatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttttgttttgttttgtttttaaattttctttctcctccctcttgatcactctacatta 260
Query: 61 gtgatcatactaaaaactgatattattgtcatttcttagtgaaaaacatatgttaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgatcatactaaaaactgatattattgtcatttcttagtgaaaaacatatgttaatgtt 320
Query: 121 aggaattgacattctgattcatactcaacccatccttaggaatgagcactataggtcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaattgacattctgattcatactcaacccatccttaggaatgagcactataggtcagt 380
Query: 181 gctcatcggactagacaattaaaagaaaaatgttttcaagacactttaatttgtcttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcatcggactagacaattaaaagaaaaatgttttcaagacactttaatttgtcttggg 440
Query: 241 attggaaagatgactcagccattaaagagaacttaactgccagaggacctgagcttggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 attggaaagatgactcagccattaaagagaacttaactgccagaggacctgagtttggct 500
Query: 301 ctaggcagccatgttatatggctcactataccctccagctcaggctccagaggtggcaat 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaggcagccacgttatatggctcactataccctccagctcaggctccagaggtggcaat 560
Query: 361 gccctcttcttctctccttaggtccctgcattcacttgcacatatccacaaacagataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccctcttcttctctccttaggtccctgcattcacttgcacatatccacaaacagataca 620
Query: 421 aacaagcatacataattaaaaacaaaataaaatgggaaaaaa--tgtgagccaaagagtg 478
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 aacaagcatacataattaaaaacaaaataaaatgggaaaaaaaatgtgagccaaagagtg 680
Query: 479 ccagagagcggtgtatggagaaggattgaacagacgtctcgcttttgctgttttcg 534
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccagagagcggggtatggagaaggattgaacagacgtctcgcttttgctgttttcg 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_a02.g1 MSMg01no059_a02.g1 CHROMAT_FILE:
MSMg01no059_a02.g1 PHD_FILE: MSMg01no059_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:24 2005
(579 letters)
>mm_chr16_41788321_41789298
Length = 978
Score = 1081 bits (559), Expect = 0.0
Identities = 574/579 (99%), Gaps = 1/579 (0%)
Strand = Plus / Minus
Query: 1 tcttcattgttaataccaacattaatgttagtgtgcatgtagatggccggtgactttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tcttcattgttaataccaacattaatgttagtgtgcatgtagatggccggtgactttgac 719
Query: 61 atctgttatttcattactctaagtgtgacactgatgctctgaaatttataattttttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atctgttatttcattactctaagtgtgacactgatgctctgaaatttataattttttcca 659
Query: 121 taagggaatccaatgcttattcaacctctgtgatttttcattttttccccctaaacacac 180
||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 658 taagggaattcaatgcttattcaacctctgtgatttttca-ttttcccccctaaacacac 600
Query: 181 tatccatcaaaaggtcttttaaattcactaaagaatgttgtcccttgatatgtggagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tatccatcaaaaggtcttttaaattcactaaagaatgttgtcccttgatatgtggagctt 540
Query: 241 cacttggttcctaataggttgagctccctgattgagaatcttgtctagcagttcatttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cacttggttcctaataggttgagctccctgattgagaatcttgtctagcagttcatttga 480
Query: 301 gaagcatcatgagttcctgatgtctggagacttctcaagacttttgcttggctggtgcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaagcatcatgagttcctgatgtctggagacttctcaagacttttgcttggctggtgcta 420
Query: 361 gccctggttgactaatattttcccatgctctcaacaaaagacccattgatgttgaagttt 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtcctggttgactaatattttcccatgctctcaacaaaagacccattgatgttgaagttt 360
Query: 421 atttaggcagttttgttttaatctcctcagcttttactctgtttcattctagggaataca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atttaggcagttttgttttaatctcctcagcttttactctgtttcattctagggaataca 300
Query: 481 tttatcctgaatttccaataatatgttttagatattcccatatttttgttgtttatttaa 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 299 tttatcctgaatttccaataatatgttttagatattcccagatttttgttgtttatttaa 240
Query: 541 ttttgcatatttctccttaatttgttttctcaaattcaa 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttttgcatatttctccttaatttgttttctcaaattcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 978
Length adjustment: 10
Effective length of query: 569
Effective length of database: 968
Effective search space: 550792
Effective search space used: 550792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
