Query= MSMg01no059_a12.b1 MSMg01no059_a12.b1 CHROMAT_FILE:
MSMg01no059_a12.b1 PHD_FILE: MSMg01no059_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:26 2005
(218 letters)
>mm_chr16_76475347_76475964
Length = 618
Score = 406 bits (210), Expect = e-118
Identities = 216/218 (99%)
Strand = Plus / Plus
Query: 1 ggcaactctgaagcatggcatagttaggctctggcttttaacctctccgtgccataggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcaactctgaagcatggcatagttaggctctggcttttaacctctccgtgccataggtt 260
Query: 61 attggatgattggctcctgtccaggttcaagatggtggaaacaggtctgagtgccaagtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 attggatgattggctcctgtccaggttcaagatggtggaaacaggtctgaatgccaagtc 320
Query: 121 caaagaaactaatgacaaggatcaaaaacaataaattatcccatgttccacgtactactt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 caaagaaactaatgacaaggatcaaaaacaataaattatcccatgttccgcgtactactt 380
Query: 181 tcagatgcaaagaaaactttcctaactacatccttgtg 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagatgcaaagaaaactttcctaactacatccttgtg 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no059_a12.g1 MSMg01no059_a12.g1 CHROMAT_FILE:
MSMg01no059_a12.g1 PHD_FILE: MSMg01no059_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:26 2005
(571 letters)
>mm_chr16_76609954_76610924
Length = 971
Score = 1033 bits (534), Expect = 0.0
Identities = 566/584 (96%), Gaps = 13/584 (2%)
Strand = Plus / Minus
Query: 1 attcccaagtctcctctgccaagcctggtggacaactccatctactctgacgctgcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 attcccaagtctcctctgccaagcctggtggacaactccatctactctgacgctgcctgg 539
Query: 61 gagaagagaaatcacatcccggtgccctggtaggtcaataaatgttaaaatcaaattagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gagaagagaaatcacatcccggtgccctggtaggtcaataaatgttaaaatcaaattagg 479
Query: 121 aaatttaaaggaaaacagatgggtgtagaacgaatttcgttgagagaaccagatatactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaatttaaaggaaaacagatgggtgtagaacgaatttcgttgagagaaccagatatactt 419
Query: 181 cctgtttcttttgcagtctttcagtgtttttatgtgtgtaattgaagggatgttaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cctgtttcttttgcagtctttcagtgtttttatgtgtgtaattgaagggatgttaaagga 359
Query: 241 aggaaaaactaaatactagataggagaaatctgggtggggaaggagaaatgataaggaag 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 358 aggaaaaactaaatactagataggagaaatctgggaggggaaggagaaatgataaggaag 299
Query: 301 gtggcagaaaggcaaaagtgagcaggcgacatgaaagaagagaagctaccacgaggggaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 298 gtggcagaaaggcaaaagtgagcaggcgacatgaaagaagagatgctaccaggaggggaa 239
Query: 361 aggtacgaagggcacacagaaggaagaaaactaacaaa------------aaaaacaaaa 408
|||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 238 aggtacgaagggcacacagaaggaagaaaaataacaaaaaaaacaaaaacaaaaacaaaa 179
Query: 409 acaaaaacaaaaacaaaaaaacccaaaagaacaaaaaaaaa-tttttgtttgaaaaggcc 467
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 178 acaaaaacaaaaacaaaaaaacctaaaagaacaaaaaaaaattttttgtttgaaaaggcc 119
Query: 468 aaaataaaatctaacatcaatattctgacaaaagttatattgaaagtgttctttttgagc 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aaaataaaatctaacatcaatattctgacaaaagttatattgaaagtgttctttttgagc 59
Query: 528 atatgctaaattttcactcttctaagcgaggtagattaaaattc 571
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 atatgctaaattttcactcttctaagcgaggtagattaaaattc 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
