Query= MSMg01no059_l22.b1 MSMg01no059_l22.b1 CHROMAT_FILE:
MSMg01no059_l22.b1 PHD_FILE: MSMg01no059_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:19 2005
(514 letters)
>mm_chr16_91761481_91762399
Length = 919
Score = 915 bits (473), Expect = 0.0
Identities = 502/519 (96%), Gaps = 14/519 (2%)
Strand = Plus / Minus
Query: 1 gctggacatacagagacacactcgcctgagaaaccaacagttgagaaacaaaccacaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gctggacatacagagacacactcgcctgagaaaccaacagttgagaaacaaaccacaggc 603
Query: 61 aacaacacttgcagatctcagatacttttttctctcaagtttgactcaaaggaattgggt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aacaacacttgcagatctcaggtacttttttctctcaagtttgactcaaaggaattgggt 543
Query: 121 tgtcacaggctagagtaaatgataaact-----tgtctaatttgtacctttcaagagtca 175
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 542 tgtcacaggctagggtaaatgataaactttaagtgtctaatttgtacctttcaagagtca 483
Query: 176 ttgttgggagaaccctttaaaagctggtatactattacagtgttaagaggtacttcctaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgttgggagaaccctttaaaagctggtatactattacagtgttaagaggtacttcctaa 423
Query: 236 acacacccaatatatctaacttatctgcaaagcaactcggtgaaataattctttcttccc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 acacacccaatatatctaacttatctgcaaagcaactcggtgaaataattctttcttccc 363
Query: 296 tcaatacaatcagatgaggcacaggcaaagaactccaaacctgaacccacccaggagttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcaatacaatcagatgaggcacaggcaaagaactccaaacctgaacccacccaggagttt 303
Query: 356 ccaggtaggaaagaccgttgtaaacatgctcctgtgtaagagataggcgcgccctgaccg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccaggtaggaaagaccgttgtaaacatgctcctgtgtaagagataggcgcgccctgaccg 243
Query: 416 cacacaagcatctcatgaagggcagagctgtcttctttacaggtggctgcactctgtctc 475
|||||||||||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct: 242 cacacaagcatctcatgaagggcacagctgtcttctttacag-------cact--gtctc 192
Query: 476 cttccacttttatccagcctttgtctgcagtgtcaggag 514
|||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cttccacttttatccagcctttgtctgcagtgtcaggag 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 919
Length adjustment: 10
Effective length of query: 504
Effective length of database: 909
Effective search space: 458136
Effective search space used: 458136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_l22.g1 MSMg01no059_l22.g1 CHROMAT_FILE:
MSMg01no059_l22.g1 PHD_FILE: MSMg01no059_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:19 2005
(186 letters)
>mm_chr16_91608456_91609041
Length = 586
Score = 321 bits (166), Expect = 2e-92
Identities = 181/186 (97%)
Strand = Plus / Plus
Query: 1 ttctctaaggtgtccctaaaatcctgatttttagcccagaaagacgacttacagtgattg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 201 ttctctaaggtgtccctaaaatcctgatttttagcccagaaagtcgacttatagtgattg 260
Query: 61 tgtgtgaagttacagaattcttcattatagaaattgtttggccggatggtggtggcgcac 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tgtgtgaagttacagaattcttcattatagaaattgtttggccgggtggtggtggcgcac 320
Query: 121 gcctttaatcccaaaacttgggaggcagaagcaggcagatttctgagttcgaggccagcc 180
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 321 gcctttaatcccaaaacttgggaggcagaggcaggcggatttctgagttcgaggccagcc 380
Query: 181 tggtct 186
||||||
Sbjct: 381 tggtct 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 586
Length adjustment: 8
Effective length of query: 178
Effective length of database: 578
Effective search space: 102884
Effective search space used: 102884
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
