Query= MSMg01no060_e23.b1 MSMg01no060_e23.b1 CHROMAT_FILE:
MSMg01no060_e23.b1 PHD_FILE: MSMg01no060_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:01 2005
(367 letters)
>mm_chr16_54353320_54354085
Length = 766
Score = 671 bits (347), Expect = 0.0
Identities = 359/363 (98%), Gaps = 1/363 (0%)
Strand = Plus / Minus
Query: 5 gaattctttccatttcttaccttaagcaaaaggctatgggtatagctgatgtgcatctcc 64
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaattttttccattttttaccttaagcaaaaggctatgggtatagctgatgtgcatctcc 507
Query: 65 catagtttctctgccagaggtttatgtggacgctttaataggcagggtcagacatgaggt 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 506 catagtttctctgccagaggtttatgtggatgctttaataggcagggtcagacatgaggt 447
Query: 125 ggttaggttgctgtgtatagtgtctatggaagaaatgtgtataactctggtgagatccct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggttaggttgctgtgtatagtgtctatggaagaaatgtgtataactctggtgagatccct 387
Query: 185 gtcagttctcctggaagcaagttttatagagaatgagcttggtgcctgggttcttgaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtcagttctcctggaagcaagttttatagagaatgagcttggtgcctgggttcttgaact 327
Query: 245 tattccttaacatgatctcattggcacatagtcctgacttgatcatacctctcaggccaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tattccttaacatgatctcattggcacatagtcctgacttgatcatacctctcaggccaa 267
Query: 305 acagctgattttaaaatattagctgccaaaactgcatacttaagtgnacaggttttcttt 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 266 acagctgattttaaaatattagctgccaaaactgcatacttaagtg-acaggttttcttt 208
Query: 365 tat 367
|||
Sbjct: 207 tat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_e23.g1 MSMg01no060_e23.g1 CHROMAT_FILE:
MSMg01no060_e23.g1 PHD_FILE: MSMg01no060_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:01 2005
(333 letters)
>mm_chr16_54180536_54181268
Length = 733
Score = 629 bits (325), Expect = 0.0
Identities = 331/333 (99%)
Strand = Plus / Plus
Query: 1 tgacttcaggactcatttctgacaagttgtcctgtattccacacataggacccagcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacttcaggactcatttctgacaagttgtcctgtattccacacataggacccagcacat 260
Query: 61 gagtcatccccacacagataagtaaaatgaataaattaaatccatgctcaaataatccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtcatccccacacagataagtaaaatgaataaattaaatccatgctcaaataatccaa 320
Query: 121 tagcttttgcctccccttaagtacctggattatgtgaaggttagtctactctaaagattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagcttttgcctccccttaagtacctggattatgtgaaggttagtctactctaaagattt 380
Query: 181 atgctgactgggatgcttgtttcaaattcttcatttatgaaggcattttaagaatatata 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 atgctgactgggatgcttgtttcaaattcttcatttatgaagacattttaagaatatata 440
Query: 241 aatataataaattttgaccataaaaaattaatattattattcacaaagtggactggtata 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatagaataaattttgaccataaaaaattaatattattattcacaaagtggactggtata 500
Query: 301 tccttgccttaacctgttctctcttcaggtatg 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 tccttgccttaacctgttctctcttcaggtatg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
