ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTAGTCTGGCAGGGAGGTTTTCACTGTGACTTAAGTCCTTTTCTTTC
TGGTATAGAATGCTTCAATCAAATTATGTATTTTCTTGCATATAAAAGAG
AACAAGCCATTTTCTCGTATTAAATCCTAGATTAGTTTAAAATAGTACAA
ACCTTCTTTAAAAATGCTTGTGTTCAACATCTTATTAATTCATGGATGCT
AGGTAGAATTGAACACCAGAGCAAGAAGCAGATCGAATTTTGCAACTCAG
TTAAATTGATCTTTAGAAATACTACTGGTAATGTCTGTCTAATTAACATC
AGAATTCATATTCAAATTTATTTCATGTAGGAGCCAGTCATTGGCTATAA
CCTCTCAAGCTATCACGGCAGATTTAGTGCTAAGGTAATATTGTGAAGGC
AGTCATATTCAGTCCACTGTGACTGAATAACCTTAACTTCCAATGACTAG
AGGATAAGAATTGTGGGAAATTTTCAGGTTCTATTAAATCTCTATATGAA
TCTCTGGATTAAGATGAAAGAACACATGGAAAGAAAGGATTTCAGAAAGA
AAAGTCGGCAAGAAACTTAGCCTGAGGCTTAGAAACTCCTAGAGGAGAAT
GTGATGCCACCCATGAAATAAAATCCATCCTTAGTGAGAATCAGAGAAAT
TA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATTTCCCTAACTGGGCTGTCTTGT
GTGGCTTCCGTGGGAGAGGAGGCACCTAACCCTTCAGAGACTTCGGGTCT
CTACCCTTTTAGAAGGGAATGGTACAAGGGATGGGGGAAGAAACCTATAA
GGGAAGACCTGGAGGGTGGGAAGCTATAAGGATGTGAAATGAATGAATGA
ATGAATGAATGAATGAATGAATGAATGAATGGATAGATAGATAGATAGAT
AGATAGATAGATAGATAGATAGATAGATAGATANATATCTTTCTATTCTT
CTTTTCCTTCCCCCCCCCCCCCTTTTTTAATCTTTATAATACCTTTTTAT
TTTTTTTTTTTTTTTTTCCCCCCCTTTTTTATATTAGTTAATTTTTCTCG
CCCATCCCCTATGACTTCTACTTTATATATGATCTATTCTATTTTTTTTC
GTACCTATCCTTTAGCTCTCCTCACCTCCGTATTTGTTTCTATACCCTCC
CGTCCTCATATAACTTGTTATCTAAACTTAGAAATCCTCTATTCTACTTA
CAGACGTATTTATTCTATATTCATCTCATTTATTAAATCTTTATCTTCAT
TTTCCTGCAGCCTATCATATATTTTTTGATAATAAATTCCTATATTATTT
GCAACGTGTTGTTCTCCTTTTGTTTCTCTGTCGTCATTATATTGTATGAT
TAAATCAATCATAACG

Query= MSMg01no060_k23.b1 MSMg01no060_k23.b1 CHROMAT_FILE:
MSMg01no060_k23.b1 PHD_FILE: MSMg01no060_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:28 2005
         (660 letters)



>mm_chr16_47578141_47579196
          Length = 1056

 Score = 1228 bits (635), Expect = 0.0
 Identities = 650/657 (98%), Gaps = 4/657 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttagtctggcagggaggttttcactgtgacttaagtccttttctttctggta 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ggaattctttagtctgggagggaggttttcactgtgacttaagtccttttctttctggta 797

                                                                       
Query: 64  tagaatgcttcaatcaaattatgtattttcttgcatataaaagagaacaagccattttct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tagaatgcttcaatcaaattatgtattttcttgcatataaaagagaacaagccattttct 737

                                                                       
Query: 124 cgtattaaatcctagattagtttaaaatagtacaaaccttctttaaaaatgcttgtgttc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cgtattaaatcctagattagtttaaaatagtacaaaccttctttaaaaatgcttgtgttc 677

                                                                       
Query: 184 aacatcttattaattcatggatgctaggtagaattgaacaccagagcaagaagcagatcg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aacatcttattaattcatggatgctaggtagaattgaacaccagagcaagaagcagatcg 617

                                                                       
Query: 244 aattttgcaactcagttaaattgatctttagaaatactactggtaatgtctgtctaatta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aattttgcaactcagttaaattgatctttagaaatactactggtaatgtctgtctaatta 557

                                                                       
Query: 304 acatcagaattcatattcaaatttatttcatgtaggagccagtcattggctataacctct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 acatcagaattcatattcaaatttatttcatgtaggagccagtcattggctataacctct 497

                                                                       
Query: 364 caagctatcacggcagatttagtgctaaggtaatattgtgaaggcagtcatattcagtcc 423
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 caagctatcaaggcagatttagtgctaaggtaatattgtgaaggcagtcatattcagtcc 437

                                                                       
Query: 424 actgtgactgaataaccttaacttccaatgactagaggataagaattgtgggaaattttc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 actgtgactgaataaccttaacttccaatgactagaggataagaattgtgggaaattttc 377

                                                                       
Query: 484 aggttctattaaatctctatatgaatctctggattaagatgaaagaacacatggaaagaa 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 376 aggttctattaaatctctatatgaatctctggattaagatgaaagaacaca----aagaa 321

                                                                       
Query: 544 aggatttcagaaagaaaagtcggcaagaaacttagcctgaggcttagaaactcctagagg 603
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 320 aggatttcagaaagaaaagtcggcaagatacttagcctgaggcttagaaactcctagagg 261

                                                                    
Query: 604 agaatgtgatgccacccatgaaataaaatccatccttagtgagaatcagagaaatta 660
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaatgtgatgccacccatgaaataaaatccatccttagtgagaatcagagaaatta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1056
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1046
Effective search space:   679900
Effective search space used:   679900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)