Query= MSMg01no061_f02.b1 MSMg01no061_f02.b1 CHROMAT_FILE:
MSMg01no061_f02.b1 PHD_FILE: MSMg01no061_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:15 2005
(273 letters)
>mm_chr16_74723904_74724576
Length = 673
Score = 462 bits (239), Expect = e-135
Identities = 263/271 (97%)
Strand = Plus / Minus
Query: 3 ggaattcactcctcttgtcccaaccagatttaagttacaaaatttaacatttgaatacat 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggaattcactcctcttggggcaaccagatttaagttacaaaatttaacatttgaatacat 261
Query: 63 atctccaccagagtagtcccgcaaattatattttatttatctatctgctcatttatttta 122
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atctccaccagagtaatcccacaaattatattttatttatctatctgctcatttatttta 201
Query: 123 tagcctggactgcaggtttccatacttcctcttctcccagttcctcttctgaacttcccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tagcctggactgcaggtttccatacttcctcttctcccagttcctcttctgaacttcccc 141
Query: 183 tctgacccccaacctccatccacacctcttctgtttctcttcagaaaagagcagggctcc 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 140 tctgacccccaacctccatccacacctcttctgtttctcttcagaaaagagcagacctcc 81
Query: 243 taggatcccaagcaggcatggcatatcaagt 273
||||||||||| |||||||||||||||||||
Sbjct: 80 taggatcccaaccaggcatggcatatcaagt 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no061_f02.g1 MSMg01no061_f02.g1 CHROMAT_FILE:
MSMg01no061_f02.g1 PHD_FILE: MSMg01no061_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:15 2005
(302 letters)
>mm_chr16_74613065_74613766
Length = 702
Score = 482 bits (249), Expect = e-140
Identities = 266/275 (96%), Gaps = 6/275 (2%)
Strand = Plus / Plus
Query: 1 aactttccagtgctggcaggctgacatgaatccaaaaatggtcatcgatgattggtgctt 60
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 201 aactttccagtgctggcaggctgacatgcatccaaaaatggccatcgatgattggtgctt 260
Query: 61 attggaaatctaccttgcaggactgtgtccataaagaaattagattggagccaagctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attggaaatctaccttgcaggactgtgtccataaagaaattagattggagccaagctcta 320
Query: 121 aatggctactttgaaaatgtgacactattagggctacttgaaacacatatgtgcacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatggctactttgaaaatgtgacactattagggctacttgaaacacatatgtgcacacac 380
Query: 181 aaactcacttactaaacatacctgaaagaggctatttgctaacaacaacaacaacaa--- 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaactcacttactaaacatacctgaaagaggctatttgctaacaacaacaacaacaacaa 440
Query: 238 ---atcattgacaaattttgtgtgtgtgtgtgtgt 269
|||||||||||||| |||||||||||||||||
Sbjct: 441 caaatcattgacaaattgtgtgtgtgtgtgtgtgt 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
