Query= MSMg01no062_m17.b1 MSMg01no062_m17.b1 CHROMAT_FILE:
MSMg01no062_m17.b1 PHD_FILE: MSMg01no062_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:45 2005
(747 letters)
>mm_chr16_79380026_79381174
Length = 1149
Score = 1361 bits (704), Expect = 0.0
Identities = 737/748 (98%), Gaps = 2/748 (0%)
Strand = Plus / Minus
Query: 1 gagaatatcgggttccacacaactaagacaaccatattgaagcccatacccaccgtggca 60
|||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 1094 gagaatattgggttccacacaactaagacaaggatattgaagcccatacccacagtggca 1035
Query: 61 aaccaaatccacagtgacacacttaatctaacaaggccacacctccaaatagtgccactc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 caccaaatccacagtgacacacttaatctaacaaggccacacctccaaatagtgccactc 975
Query: 121 cctggcgcaagcatatagaaaccatctgagttgacttaggaaattttgtagcaacctgtt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 974 cctggcgcaagcatatagaaaccatttgagttgacttaggaaattttgtagcaacctgtt 915
Query: 181 aaagaaacttgagaataaacagttttatcactcacatgtcagagatgcaataatcagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aaagaaacttgagaataaacagttttatcactcacatgtcagagatgcaataatcagttg 855
Query: 241 caggagaaaatgactcaatacttcatgaggactagatgaaaacttcagtagactgaatgt 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 854 caggagaaaatgactcaatactgcatgaggactagatgaaaacttcagtagactgaatgt 795
Query: 301 tcacaggttcaaattcaggtgctgaagaactaatatagaggattatcatagtaggaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tcacaggttcaaattcaggtgctgaagaactaatatagaggattatcatagtaggaagtg 735
Query: 361 gtgtttggtagtgctaggtcaataaaggtacttccgt-agggtgtgccctggaatgctta 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 734 gtgtttggtagtgctaggtcaataaaggtacttccgtgagggtgtgccctggaatgctta 675
Query: 420 gaaaccagaacccag-cctcagtggaaacagccatcccaaggactgttttctagttcatc 478
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gaaaccagaacccagccctcagtggaaacagccatcccaaggactgttttctagttcatc 615
Query: 479 ttaccttcagatacataagatgatcaaatgatataagaaacaaattattgttgtatacaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttaccttcagatacataagatgatcaaatgatataagaaacaaattattgttgtatacaa 555
Query: 539 gtgacagagtgtattataattttttatagcagattgaaacagaagaaaatttggtctgta 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttgacagagtgtattataattttttatagcagattgaaacagaagaaaatttggtctgta 495
Query: 599 gctgaaaatctccatattactgtacatgagaagaatacaaactaatatgcttaaaagatg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gctgaaaatctccatattactgtacatgagaagaatacaaactaatatgcttaaaagatg 435
Query: 659 tggggctgttggcaaccagcacacaagggtgaaggtcacagagtcaaggaaaagggtttc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tggggctgttggcaaccagcacacaagggtgaaggtcacagagtcaaggaaaagggtttc 375
Query: 719 agacagcccatgtgtaggacagaaatga 746
|||||||||||||| |||||||||||||
Sbjct: 374 agacagcccatgtgaaggacagaaatga 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 747
Length of database: 1149
Length adjustment: 10
Effective length of query: 737
Effective length of database: 1139
Effective search space: 839443
Effective search space used: 839443
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no062_m17.g1 MSMg01no062_m17.g1 CHROMAT_FILE:
MSMg01no062_m17.g1 PHD_FILE: MSMg01no062_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:45 2005
(438 letters)
>mm_chr16_79236291_79237128
Length = 838
Score = 683 bits (353), Expect = 0.0
Identities = 371/377 (98%)
Strand = Plus / Plus
Query: 1 cctttaccacagagaaatgatttagaaaacttctggatgggttttcatacctacccctct 60
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cctttaccatagagaaatgatttagaaaacttctggatgggttttcatatctacccctct 260
Query: 61 tattatttgactgtaatttgtttgttatttgactaagagcttatttatgactcacaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattatttgactgtaatttgtttgttatttgactaagagcttatttatgactcacaatca 320
Query: 121 ttttgaatgtcagatatgtcaaaaaagagacagaaaatattgtctcagaaattaaagcac 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ttttgaatgtcagatatgtcaaaaaagagacaggaaatattgtctcagaaattaaagcac 380
Query: 181 ttactgcttttccagaggaccagagtttaattcctagcacccacttgttggcctacaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttactgcttttccagaggaccagagtttaattcctagcacccacttgttggcctacaact 440
Query: 241 tgctctaatatcagttcaaagtgattagacatttacttctggcttccttcactcacataa 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tgctctaatatcagttcaaagtgattagacatttacttctggcttcctttactcacataa 500
Query: 301 actcccaaaggctcatacacagaagtaaatcaagacaataaacaactattttgaaagtca 360
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actcacagaggctcatacacagaagtaaatcaagacaataaacaactattttgaaagtca 560
Query: 361 acaaacacttttgctaa 377
|||||||||||||||||
Sbjct: 561 acaaacacttttgctaa 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
