Query= MSMg01no066_n17.b1 MSMg01no066_n17.b1 CHROMAT_FILE:
MSMg01no066_n17.b1 PHD_FILE: MSMg01no066_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:47 2005
(616 letters)
>mm_chr16_83753077_83754094
Length = 1018
Score = 1164 bits (602), Expect = 0.0
Identities = 614/618 (99%), Gaps = 2/618 (0%)
Strand = Plus / Minus
Query: 1 ttcctacagcttttc-ctaaatgattcatgttttagctctctacttaattattatattgt 59
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ttcctacagcttttcattaaatgattcatgttttagctctctacttaattattatattgt 759
Query: 60 tgtatatatccctaaactggacatataaatgtgcttctcatttaaacacaagatttgatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tgtatatatccctaaactggacatataaatgtgcttctcatttaaacacaagatttgatg 699
Query: 120 agtactgatttttctctcaacaaacatcagtttagagatttttttcataatggctctctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agtactgatttttctctcaacaaacatcagtttagagatttttttcataatggctctctt 639
Query: 180 ttaaattattcaagaattttcacttatttattcttcaataa-ttttttttctcactcaaa 238
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 638 ttaaattattcaagaattttcacttatttattcttcaataatttttttttctcactcaaa 579
Query: 239 gaatggctatttgtaaggagcgggcatttagctatataggtagatcattactggagactt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaatggctatttgtaaggagcgggcatttagctatataggtagatcattactggagactt 519
Query: 299 aactgttaagttttcattaaaattataaatagaaaatagaaatatcaaatttcatcatgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aactgttaagttttcattaaaattataaatagaaaatagaaatatcaaatttcatcatgg 459
Query: 359 ccaaatgaatgcaaggattttaaacataacctcttagcattaatacctaagaacattatt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ccaaatgaatgcaaggattttaaacataacctcttagcattaatacctaagaacattatt 399
Query: 419 ttgaactaggttaaatataggaaaacagtagacatacaaattaatgtttaaaaaaactga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttgaactaggttaaatataggaaaacagtagacatacaaattaatgtttaaaaaaactga 339
Query: 479 agtgcaaatatgtagaagcctagtactttattaaataatatgagtggatatgagccatgg 538
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agtgcaaatgtgtagaagcctagtactttattaaataatatgagtggatatgagccatgg 279
Query: 539 tcctggcctacgagttataaatgagaaggtgtcaggcaatctaagagaaagagttttgaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcctggcctacgagttataaatgagaaggtgtcaggcaatctaagagaaagagttttgaa 219
Query: 599 ctgtaagatcctgatatc 616
||||||||||||||||||
Sbjct: 218 ctgtaagatcctgatatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1018
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1008
Effective search space: 610848
Effective search space used: 610848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_n17.g1 MSMg01no066_n17.g1 CHROMAT_FILE:
MSMg01no066_n17.g1 PHD_FILE: MSMg01no066_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:48 2005
(110 letters)
>mm_chr16_83617330_83617839
Length = 510
Score = 209 bits (108), Expect = 4e-59
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 cttgactctcttgagataatgaagatgaaaatataaataaagcttaaggtgtgtgccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgactctcttgagataatgaagatgaaaatataaataaagcttaaggtgtgtgccagg 260
Query: 61 gaaagggattggctagggagtgggggcggggtgtgggatgggggcagg 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagggattggctagggagtgggggcggggtgtgggatgggggcagg 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 510
Length adjustment: 8
Effective length of query: 102
Effective length of database: 502
Effective search space: 51204
Effective search space used: 51204
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
