Query= MSMg01no068_b01.b1 MSMg01no068_b01.b1 CHROMAT_FILE:
MSMg01no068_b01.b1 PHD_FILE: MSMg01no068_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:22 2005
(367 letters)
>mm_chr16_69476136_69476905
Length = 770
Score = 625 bits (323), Expect = 0.0
Identities = 358/371 (96%), Gaps = 7/371 (1%)
Strand = Plus / Minus
Query: 2 ggaattctataaagtatttcgaatgctcatagatgcatatacaggcaaacaactatgtat 61
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ggaattctataaagtaggtagaatgctcatagatgcatatacaggcaaacaactatgtat 511
Query: 62 ttaaatgttttgtaatatcttgctttac-tgtctttattttctctctctttctctctcct 120
|||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 510 ttaaatgtttcgtaatatcttgcttt-cttgtctttattttctctctctatctctctcct 452
Query: 121 aatttatctgtctctttctttgatactctagggacatttcacaaaatgcattatagttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aatttatctgtctctttctttgatactctagggacatttcacaaaatgcattatagttat 392
Query: 181 ataaacatatatggctatgtagcatcagttaattttcacctcatgatatttctacctcgg 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 391 ataaacatatatggctatgtagcatcagttaattttcaactcatgatatttctacctcgg 332
Query: 241 ccccttgagtgctacattactgatacatatctgaggtttcctgttttttgttttttgttt 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 331 ccccttgagtgctacattactgatacatatctgaggtttcctgttttt-gttttttgttt 273
Query: 301 tt-gtttttt---caacaaagtaagaagaagagatcattctttgagtatgaatctgtagc 356
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tttgtttttttttcaacaaagtaagaagaagagatcattctttgagtatgaatctgtagc 213
Query: 357 aaggaatgcta 367
|||||||||||
Sbjct: 212 aaggaatgcta 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 770
Length adjustment: 9
Effective length of query: 358
Effective length of database: 761
Effective search space: 272438
Effective search space used: 272438
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_b01.g1 MSMg01no068_b01.g1 CHROMAT_FILE:
MSMg01no068_b01.g1 PHD_FILE: MSMg01no068_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:22 2005
(498 letters)
>mm_chr16_69288876_69289773
Length = 898
Score = 903 bits (467), Expect = 0.0
Identities = 491/499 (98%), Gaps = 2/499 (0%)
Strand = Plus / Plus
Query: 1 tcttgaagggtaaaattgaaaaataaaagcaagatacttatttgtctaatatatattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgaagggtaaaattgaaaaataaaagcaagatacttatttgtctaatatatattata 260
Query: 61 tacacatgaaaaacttttaattttacccattctccagtgactcctataaacttgtttatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tacacatgaaaaacttttaattttacccattctccagtgactcctataaactagtttatt 320
Query: 121 gcagaaatgttctgagattatttacaaactcttcatcagccgtgtttctcattctgaagt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagaaatgttctgggattatttacaaactcttcatcagccgtgtttctcattctgaagt 380
Query: 181 aaaactttccagctcc-aaacaaaaaccaggatatctgcagttcatttgccagagtccct 239
|||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 aaaactttccag-tcccaaacaaaaaccaggatatctgcagttcgtttgccagagtcccg 439
Query: 240 gaatgtgtatccagtattgacaaaggattgatactgtgtcagtcagctttctaattaagg 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaatgtgtatccaggattgacaaaggattgatactgtgtcagtcagctttctaattaagg 499
Query: 300 catggagcaatgtgagaagaaaacttactcatggaacttttttactttcaaagttttaaa 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatggagcaatgtgagaagaaaacttactcatggaacttttttactttcaaagttttaaa 559
Query: 360 tatggattcttgttatggggtgatgtgaaagacagagaaggagatgattatgaaaaaaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatggattcttgttatggggtgatgtgaaagacagagaaggagatgattatgaaaaaaac 619
Query: 420 attcaacctttccacccaatatttcaagtctttggactaacagctgtcagttgaaatcca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attcaacctttccacccaatatttcaagtctttggactaacagctgtcagttgaaatcca 679
Query: 480 cacgcttaggtttgagccc 498
|||||||||||||||||||
Sbjct: 680 cacgcttaggtttgagccc 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
