Query= MSMg01no068_e19.b1 MSMg01no068_e19.b1 CHROMAT_FILE:
MSMg01no068_e19.b1 PHD_FILE: MSMg01no068_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:41 2005
(277 letters)
>mm_chr16_89861338_89862014
Length = 677
Score = 427 bits (221), Expect = e-124
Identities = 257/271 (94%), Gaps = 6/271 (2%)
Strand = Plus / Minus
Query: 4 ggaattctgttgtgaagtgtttccctgttcagacggtaccttggaggcatctcagcagag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggaattctgttgtgaagtgtttccctgttcagacggtaccttggaggcatctcagcagag 287
Query: 64 gatagctttaaaaagaaatagaagtgtaatttcctcctcacctaacataacaatgtattt 123
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 286 gatagctttaaaaagaaatagaagtgtcatttcctcctcacctaacataacaatgtaagt 227
Query: 124 tatggaagatctatctgacacttacacacacacacacacacacacacacacacacacacg 183
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 226 tatggaagatctatgtgacactt----acacacacacacacacacacacacacacacacg 171
Query: 184 agggagagtatatgtatgcatgagagaaaaccctccac-ccatcaatacatttgtcagcc 242
||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 170 agggagagtatatgtctgcatgagagaaaaccttcc-ctccatcaatacatttgtcagcc 112
Query: 243 ttgggtacagctcagtggcagggagcttgcc 273
|||||||||||||||||| || |||||||||
Sbjct: 111 ttgggtacagctcagtggtagagagcttgcc 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_e19.g1 MSMg01no068_e19.g1 CHROMAT_FILE:
MSMg01no068_e19.g1 PHD_FILE: MSMg01no068_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:41 2005
(243 letters)
>mm_chr16_89701672_89702313
Length = 642
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 aatcacgttcgcctagccttcataaactgatgtcttggggctggggcgatagcgcacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcacgttcgcctagccttcataaactgatgtcttggggctggggcgatagcgcacttg 260
Query: 61 ctaaaatacgtgctgaacaagcatgaagaccagggatcaatccaccagcacccacttaaa 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaaatacgtgctgaacaagcatggagaccagggatcaatccaccagcacccacttaaa 320
Query: 121 taatcccgccctcctcccctaatgctcaaacctcttagagttgctctaagaatgagataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 taatcccgccctcctcccctaatgctcaaacctcttagagttgctctaagaatgagaga- 379
Query: 181 cttggcgcagaagccttacattccctcgccacttcaaggatataaaagatttgccagggt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 cttggcgcagaagccttacattccctcgccacttcaaggatataaaaggtttgccagggt 439
Query: 241 gac 243
|||
Sbjct: 440 gac 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
