Query= MSMg01no068_i09.b1 MSMg01no068_i09.b1 CHROMAT_FILE:
MSMg01no068_i09.b1 PHD_FILE: MSMg01no068_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:59 2005
(305 letters)
>mm_chr16_49642169_49642873
Length = 705
Score = 294 bits (152), Expect = 4e-84
Identities = 155/156 (99%)
Strand = Plus / Minus
Query: 8 gaattcacttcataaatagttccttctggtgctgctttttctttctgatgtttgctccct 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gaattcacttcataaatagttccttctggtgctgctttttctttctgatgtttgctccct 300
Query: 68 ctatgaaagcagtatggagtcacagaatcagcaaatctccctgtcttctgtgtagaaact 127
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctatgaaagcagcatggagtcacagaatcagcaaatctccctgtcttctgtgtagaaact 240
Query: 128 aaaggttagtttttctttttcttccaataaaattct 163
||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaaggttagtttttctttttcttccaataaaattct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_i09.g1 MSMg01no068_i09.g1 CHROMAT_FILE:
MSMg01no068_i09.g1 PHD_FILE: MSMg01no068_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:59 2005
(283 letters)
>mm_chr16_49524861_49525543
Length = 683
Score = 505 bits (261), Expect = e-147
Identities = 279/285 (97%), Gaps = 4/285 (1%)
Strand = Plus / Plus
Query: 1 acataaaagtagaaggatatgcctatgtcagaggaacagagagagacagagacagagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acataaaagtagaaggatatgcctatgtcagaggaacagagagagacagagacagagaga 260
Query: 61 gaagaggagggagatttttcataaggtaatacccattaaatgtacaagaatatgcaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaggagggagatttttcataaggtaatacccattaaatgtacaagaatatgcaaaca 320
Query: 121 gaattttggaagtgagaccctcaggctccagtgtagggctgatacagaacaaagacagtt 180
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattttggaagcgagaccctcaggctccagtgtagggctgatacagaacaaagacagtt 380
Query: 181 tgaaaaggaggactgggtggagagtcactctgaggacgtctccagcacaaagggttctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaaaggaggactgggtggagagtcactctgaggacgtctccagcacaaagggttctaa 440
Query: 241 gaaaagattctc-atattgagt-agagcatgtatgaatgacgtgg 283
|||||||||| | |||||| || ||||||||||||||||||||||
Sbjct: 441 gaaaagattc-ctatattg-gttagagcatgtatgaatgacgtgg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
