Query= MSMg01no069_k24.b1 MSMg01no069_k24.b1 CHROMAT_FILE:
MSMg01no069_k24.b1 PHD_FILE: MSMg01no069_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:30 2005
(294 letters)
>mm_chr16_84171083_84171775
Length = 693
Score = 543 bits (281), Expect = e-159
Identities = 290/293 (98%), Gaps = 1/293 (0%)
Strand = Plus / Plus
Query: 1 tactttttctacttttccccttgctggaactatgtatcatctgtagtccagcacaactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 201 tactttttctacttttccccttgctggaactatgtatcatctgtagtccagaa-aactta 259
Query: 61 tcacatttttatgaaaattgaacaaatgtgaagggattgctgagttcactgtatactttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcacatttttatgaaaattgaacaaatgtgaagggattgctgagttcactgtatactttg 319
Query: 121 ctgggatgtagtgaagccacacactgccttttcaatggcacagcttgctagtgaatccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgggatgtagtgaagccacacactgccttttcaatggcacagcttgctagtgaatccca 379
Query: 181 ttgtgttgatattttcaccgcagtggggctgtctttgttcaacattctagttaagtgaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 ttgtgttgatattttcaccgcagtggggctgtctttgttcaacattctagctaagtgaaa 439
Query: 241 atgttaaaagcttgccctttagcaattaacggataccctctatacacaatatg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgttaaaagcttgccctttagcaattaacggataccctctatacacaatatg 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_k24.g1 MSMg01no069_k24.g1 CHROMAT_FILE:
MSMg01no069_k24.g1 PHD_FILE: MSMg01no069_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:31 2005
(240 letters)
>mm_chr16_84334553_84335192
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%)
Strand = Plus / Minus
Query: 1 agtagggaatttattgctagtgcttctttttctggtgggtcagtcagaagcatctcgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtagggaatttattgctagtgcttctttttctggtgggtcagtcagaagcatctcgctg 506
Query: 61 gccagggagctcattgactttttgaatgagagagaaaaaggaaaggaaagatgccactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gccagggagctcattgactttttgaatgagagagaaaaaggaaaggaaagatgccactca 446
Query: 121 cacagacaggtacacacagggtgaagcggaaaatggtgcaccacctttctttattgcttc 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 cacagacaggtacacacagggtgaagcagaaaatggtgcaccacctttctttattgcttc 386
Query: 181 cagccttttgtatccttaatataaaaagttctctatgcaagagtgaattacatattaggt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 cagccttttgtatccttaatataaaaagttctctatgtaagagtgaattacatattaggt 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
