Query= MSMg01no070_l17.b1 MSMg01no070_l17.b1 CHROMAT_FILE:
MSMg01no070_l17.b1 PHD_FILE: MSMg01no070_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:54 2005
(244 letters)
>mm_chr16_33947178_33947817
Length = 640
Score = 412 bits (213), Expect = e-119
Identities = 234/243 (96%), Gaps = 4/243 (1%)
Strand = Plus / Minus
Query: 1 cagccaagccgtgacagaaatgaggcccctgatcaatggctatacctctattgggctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagccaagccgtgacagaaatgaggcccctgatcaatggctatacctctattgggctgtg 380
Query: 61 tcccagaggctcaagcctagcccacctccagggcaggaggcttcaggaacaaaccaggca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 tcccagaggctcaagcctagcccacctccagggcaggaggcttcaggaacaaac----ca 324
Query: 121 ggcaggcaggaggtagcatgcaccatttccgaaaggcctggtctgaggtcaggtatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 323 ggcaggcaggaggtagcatgcaccatttccgaaaggcctggtctgaggtcaagcatttct 264
Query: 181 gagcccttagcaaagagagctaaggagcaaatgtgcttatttctaagcaaagacagggct 240
||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 263 gagcccttagcaaagagcgctaaggagtaaatgtgcttatttctaagcaaagatagggct 204
Query: 241 tga 243
|||
Sbjct: 203 tga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 640
Length adjustment: 9
Effective length of query: 235
Effective length of database: 631
Effective search space: 148285
Effective search space used: 148285
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no070_l17.g1 MSMg01no070_l17.g1 CHROMAT_FILE:
MSMg01no070_l17.g1 PHD_FILE: MSMg01no070_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:54 2005
(340 letters)
>mm_chr16_33801218_33801957
Length = 740
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%)
Strand = Plus / Plus
Query: 1 ttttaattaaaaaaaaatccaataaaacgaaaacacagcaggcccacggttgtgtcagta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ttttaattaaaaaaaaatccaataaaaggaaaacacagcaggcccacggttgtgtcagta 260
Query: 61 aagcttaatcaggacaaaagggtaagcagttaaagcccgtgtccttttcccctaaactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcttaatcaggacaaaagggtaagcagttaaagcccgtgtccttttcccctaaactcc 320
Query: 121 atggcccttggagaactctagaagcaacctctactgccagttcctgtgtcccccttcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggcccttggagaactctagaagcaacctctactgccagttcctgtgtcccccttcaga 380
Query: 181 gacaacctaagcaaatgcaataagtacaactgctctcttgtcacagaggagcatgtcacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaacctaagcaaatgcaataagtacaactgctctcttgtcacagaggagcatgtcacg 440
Query: 241 catactggttcttaaaattagctttttgaacggggagaagtggcgcacgcctttactccc 300
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 catactgggtcttaaaattagctttttgaactgggagaagtggcgcacgcctttactccc 500
Query: 301 agcactcagaaggcagagaggcaggcggatctccgagttc 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcactcagaaggcagagaggcaggcggatctccgagttc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
