TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTTGTATGCTTTGTGTAGGTACTGCAGAACAATCATGGGATACCT
CCACTATTTAGTTAGCTGAAGGCGCTCTGATTATTCTTTTCATCAATGAA
AACTACATATGGCTGCTAGCAGGTCAAAAATATTTCTATATGTTGTTAAC
ATAAATATGATGTTCTCTGCACAGAATTTTTTATTATAGTGACTATGTAT
TATAAAAAAATAGAAAGAATAAAGAATGAAATTATAGTTTAATGTATGGA
TGAAAGATCATATCCTGGCTTGCAAACACTAATATATCATAGTCAATGCT
ATTTTATAATTTGTCTTGATTTTTACATCATTTTTTGAAACAAAGAGCCT
TTCTTGCCAAATGTAATACTGACCCATAGCTATGTTATATAATACATGCA
TAACAGTCCATTTATATTCCAAATGATCTAGACTATTTTTAAGATCTATG
ATTTTTGTAGTCAAATTTCAGTAATGTAAGAAGAAAAACTTAGAAGAACT
TTGTTGTCTCTCTTTTTTTATGGTCTTCCTCTTTCTCATTTTGTTAGATT
CTTGGGAATTTTATATAATATATTTTGAACACTCAGAACTACTCTGAGAT
CCACTTCCCCTTCCTTACACATCCAAATTTGTTTCCTCTTTTGATGTTG

CACTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTT
TAATTGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATAT
ATGTTGGATATTTGTCTCCTATCTGATTTAGGATAGGTAAAGATCCTTTC
CCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTATGTTTTGCCTTGC
AGAAGCTTTGGAGTTTCATAAGGTCCCATTTGTCAATTCTCAATTTTACA
GCCAAGCCATTGCTGTTCTATTCAGGAGTTTTTCCCCTGTGCCCATATCT
TCAAGGCTTTTCCCCACTTCCTCCTCTATAAGTTTCAGTGTCTCTGTCTT
TATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACATGGTGTAC
TTTATGGATTGATTCGCATTCTTCTACTTAATACTTACCATCTGTGCTTA
CCTTGCCACTATCATTTCCTACTCTCTATTTTCTTATAGCTTTTGGAGTT
CTACTTACTATCTCGTGTACTTTCCGAATCCATCTCTGTCTTTCTGTCTC
CTTACTTCCCCTTTCTTCCTTTCTCGCCCTTGCTTCGTTCCTTTTCTTCG
CTCTCCCTTTTTTTGCTCTCCCCCGTTCTTCCCCCCTCTTTCCTCTTT

Query= MSMg01no073_f06.b1 MSMg01no073_f06.b1 CHROMAT_FILE:
MSMg01no073_f06.b1 PHD_FILE: MSMg01no073_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:21 2005
         (640 letters)



>mm_chr16_80921436_80922475
          Length = 1040

 Score =  890 bits (460), Expect = 0.0
 Identities = 539/582 (92%), Gaps = 29/582 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatttgtatgctttgtgtaggtactgcagaacaatcatgggatacctccactatt 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gaattcatttgtatgatttgtgtaggtactgcagaacaatcatgggatacctccactatt 522

                                                                       
Query: 65  tagttagctgaaggcgctctgattattcttttcatcaatgaaaactacatatggctgcta 124
           |||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 521 tagttagctgaaggcgctctgattattcctttcatcaatgaaaattacctatggctgcta 462

                                                                       
Query: 125 gcaggtcaaaaatatttctatatgttgttaacataaatatgatgttctctgcacagaatt 184
           |||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||| |||
Sbjct: 461 gcaggtcaaaaatatttccatatgttgttaatgtaaatatcatgttctctgcacag-att 403

                                                                       
Query: 185 ttttattatagtgactatgtattataaaaaaatag-aaagaataaagaatgaaattatag 243
           |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 402 ttttattatagtgactatgtcttataaaaaaatagaaaagaataaagaatgaaattatag 343

                                                                       
Query: 244 tttaatgtatggatgaaagatcatatcctggcttgcaaacactaatatatcatagtcaat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 342 tttaatgtatggatgaaagatcatatcctggcttgcaaacactaatatatcatagtcaac 283

                                                                       
Query: 304 gctattttataatttgtcttgatttttacatcattttttgaaacaaagagcctttcttgc 363
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 282 gctattttataatttgtcttgatttttacatcattttttgaaacaaaaagcctttcttgc 223

                                                                       
Query: 364 caaatgtaat--------------------------actgacccatagctatgttatata 397
           ||||||||||                          ||||||||||||||||||||||||
Sbjct: 222 caaatgtaattctgaccctttctttccaaatgtaatactgacccatagctatgttatata 163

                                                                       
Query: 398 atacatgcataacagtccatttatattccaaatgatctagactatttttaagatctatga 457
           |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 162 atacatgcataacagtccatttttattctaaatgatctagactatttttaagatctatga 103

                                                                       
Query: 458 tttttgtagtcaaa-tttcagtaatgtaagaagaaaaacttagaagaactttgttgtctc 516
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tttttgtagtcaaaatttcagtaatgtaagaagaaaaacttagaagaactttgttgtctc 43

                                                     
Query: 517 tctttttttatggtcttcctctttctcattttgttagattct 558
           |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 42  tctttttttatggtcttcctctttctcattttattagattct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)