Query= MSMg01no074_i23.b1 MSMg01no074_i23.b1 CHROMAT_FILE:
MSMg01no074_i23.b1 PHD_FILE: MSMg01no074_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:57 2005
(215 letters)
>mm_chr16_25494046_25494660
Length = 615
Score = 369 bits (191), Expect = e-107
Identities = 200/203 (98%)
Strand = Plus / Plus
Query: 9 gcctttagtctcaaggtcctagctgaaaacaatctatctgtgttgctctgaaaggatagg 68
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gccttcagtctcaaggtcctagctgaaaacaatctatctgtgttgctctgaaaggatagg 268
Query: 69 gccagctgcatcacaagcttcatgaaatgatctgagaaacgaagcttagaaaccacaggg 128
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gccaactgcatcacaagcttcatgaaatgatctgagaaacgaagcttagaaaccacaggg 328
Query: 129 acttcttggaaagctagtgaaaagcccagcttccccaaagtccagccactagtttccatt 188
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acttcttggaaagctggtgaaaagcccagcttccccaaagtccagccactagtttccatt 388
Query: 189 ccagctataacagttgtaatgca 211
|||||||||||||||||||||||
Sbjct: 389 ccagctataacagttgtaatgca 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_i23.g1 MSMg01no074_i23.g1 CHROMAT_FILE:
MSMg01no074_i23.g1 PHD_FILE: MSMg01no074_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:58 2005
(187 letters)
>mm_chr16_25650324_25650910
Length = 587
Score = 323 bits (167), Expect = 4e-93
Identities = 184/195 (94%), Gaps = 9/195 (4%)
Strand = Plus / Minus
Query: 1 tctatttctcatagatttcaggttttatttctcacgtttgctttaaactctaatttcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tctatttctcatagatttcaggttttatttctcacgtttgctttaaactctaatttcaat 297
Query: 61 agaatgaggtgttagagttgattgtagggccccacttggtgaaatgctgctttctgcttg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 296 agaatgaggtgttagtgttgattgtagggccccacttggtgaaatgctgctttctacttg 237
Query: 121 gcacctttagtgtcaccagtgtgcaaa---------ctggaacattcttccatgaagaat 171
||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 236 gcacctttagtgtcaccagtgtgcaaactggaacatctggaacattcttccatgaagaat 177
Query: 172 gccagaataaatttg 186
|||||||||||||||
Sbjct: 176 gccagaataaatttg 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
