Query= MSMg01no075_p12.b1 MSMg01no075_p12.b1 CHROMAT_FILE:
MSMg01no075_p12.b1 PHD_FILE: MSMg01no075_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:46 2005
(329 letters)
>mm_chr16_25398995_25399723
Length = 729
Score = 547 bits (283), Expect = e-160
Identities = 316/327 (96%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 4 atggatgcatctggaggatatcatcctgagtgaggtaacctaatcacaaaagaacacacg 63
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 729 atggatgcatctggaggatatcatcctgagtgaggtaacccaatcacaaaagaacacaca 670
Query: 64 tgatat-cactcactggtaagcagatattattgcagaagcttggaatactcaagatacaa 122
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 669 tgatatgcactcactggtaagcagatattagcgcagaagcttggaatactcaagatacaa 610
Query: 123 ttcacaaaccacataaaactcatgaagaaggaagacaaaatccctccatccttcttagac 182
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 609 ttcacaaaccacataaaactcgtgaagaaggaagacacaatccctccatccttcttagac 550
Query: 183 tggggaataaaccacccatgactttagtatctcttgaacactggtgctttgcatttctcc 242
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 549 tggggaataaaccacccatgactttagtatctcttgaacactggtgcttcgcatttctcc 490
Query: 243 ccagatccaaagcaacggattggaaaaagagctgatcccttctcagagtcctttttttcc 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 489 ccagatccaaagcaacggattggaaaaagagctgatcccttcttagagtcctttttttcc 430
Query: 303 agtcctagtgtcagttcctcactgggg 329
|||| |||||||||||||||||||||
Sbjct: 429 tgtcccagtgtcagttcctcactgggg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_p12.g1 MSMg01no075_p12.g1 CHROMAT_FILE:
MSMg01no075_p12.g1 PHD_FILE: MSMg01no075_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:46 2005
(332 letters)
>mm_chr16_25309376_25310107
Length = 732
Score = 603 bits (312), Expect = e-177
Identities = 327/332 (98%)
Strand = Plus / Plus
Query: 1 agcctgtggtccctccccagcagatctgtgtttttcgccagcccctccccctccccctat 60
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 201 agcctgtggtccctccccagcagacctgtgtttttcgccagccccgccccctcccgctat 260
Query: 61 tctgaaatgaaggcacaggtgcagagcagagggctcctctgactcaggaagggctgggag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tctgaaatgaaggcacaggtgcagagcagagggctcctctgtctcaggaagggctgggag 320
Query: 121 agatgagaccctccttctgctcatcctgccctaggactcagcatccttgctagcccgcta 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 agatgagaccctccttctgctcatcctgccccaggactcagcatccttgctagcccgcta 380
Query: 181 tcactaatgcacaaaatgtgaaattgtggagaatcatttgccaatattcttatctgcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcactaatgcacaaaatgtgaaattgtggagaatcatttgccaatattcttatctgcact 440
Query: 241 ggcacagaagcgagcttgctggagagctgcgaggtgttggagtattgttgtttatccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcacagaagcgagcttgctggagagctgcgaggtgttggagtattgttgtttatccacc 500
Query: 301 acacatccctcggctgcttgcacagagactca 332
||||||||||||||||||||||||||||||||
Sbjct: 501 acacatccctcggctgcttgcacagagactca 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
