Query= MSMg01no076_c24.b1 MSMg01no076_c24.b1 CHROMAT_FILE:
MSMg01no076_c24.b1 PHD_FILE: MSMg01no076_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:04 2005
(643 letters)
>mm_chr16_83243938_83244980
Length = 1043
Score = 1216 bits (629), Expect = 0.0
Identities = 635/637 (99%)
Strand = Plus / Minus
Query: 7 gaattctttgtaatatcctgggatatggactacttaagtacaagttgacaacatttcata 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 gaattctttgtaatagcctgggatatggactacttaagtacaagttgacaacatttcata 909
Query: 67 ttatggactgtatttttttaatccaggtattatttttacaaataactaaaataaataatt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ttatggactgtatttttttaatccaggtattatttttacaaataactaaaataaataatt 849
Query: 127 taatactagtaggtagttggcttaattcaatttcatcatgagtatagataactactctgc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 taatactagtaggtagttggcttaattcaatttcatcatgagtatagataactactctgc 789
Query: 187 taatctagcacacaggactggagtgtttcttcatgactgcaagaaagaagagatgtatac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 taatctagcacacaggactggagtgtttcttcatgactgcaagaaagaagagatgtatac 729
Query: 247 agaaatttacataacagagatccaaagttttttacttgataaactttagagtatttctta 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agaaatttacataacagagatccaaagttttttacttgataaactttagagtatttctta 669
Query: 307 attgtattatagacatttccatgacaattatctttcctcaaaaatcaaacccaaaactta 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 attgtattatagacatttccatgacaattatctttcctcaaaaatcaaacccaaaactta 609
Query: 367 tcctatgtgtattatgccagaaacaaaggcaaatatgtttgcagctttctgcaatgtcag 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tcctatgtgtattatgccagaaacaaaggcaaatatgtttgcagctttctgcaatgtcag 549
Query: 427 aaaattattgaatgaaagtgcacaagttggagcagattctacatctgtaatttgtatatt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aaaattattgaatgaaagtgcacaagttggagcagattctacatctgtaatttgtatatt 489
Query: 487 gagtctattctggtaatctggccaataaaagtgttttattccaatcataatggcaaatat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gagtctattctggtaatctggccaataaaagtgttttattccaatcataatggcaaatat 429
Query: 547 taactctaatatcaaatagcattagtagatctactgatcaactactttatgtacctacct 606
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 428 taactctaatatcaaatagcattagtagatctactgatctactactttatgtacctacct 369
Query: 607 ctgtctacataggacttacagaatgaacacaggctaa 643
|||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctgtctacataggacttacagaatgaacacaggctaa 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_c24.g1 MSMg01no076_c24.g1 CHROMAT_FILE:
MSMg01no076_c24.g1 PHD_FILE: MSMg01no076_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:04 2005
(330 letters)
>mm_chr16_83084953_83085682
Length = 730
Score = 601 bits (311), Expect = e-176
Identities = 326/331 (98%), Gaps = 2/331 (0%)
Strand = Plus / Plus
Query: 1 tgaaattaatatttcatgagtatttgattaataaaaatatcttagcaaaatctatgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaattaatatttcatgagtatttgattaataaaaatatcttagcaaaatctatgtaaa 260
Query: 61 tatatgtgtaacaattacattatttcaaattattgacattctttgtcatctaataagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatgtgtaacaattacattatttcaaattattgacattctttgtcatctaataagaca 320
Query: 121 ttcaactccctgtagtaaggcattgtaattaggttttaaacaaaaccatttaatatggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaactccctgtagtaaggcattgtaattaggttttaaacaaaaccatttaatatggtt 380
Query: 181 tctaatatcataagcaaggaaatacaaatgactttagtagtttcattggaaaacagaaac 240
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaatattataagcaagaaaatacaaatgactttagtagtttcattggaaaacagaaac 440
Query: 241 tcagaaaaatgaaagggacagaccttgtaaatttcacgtatattttacaa-tatttcata 299
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 441 tcagaaaaatgaaagggacagaccttgtaaatttcacgtatatttta-aagtatttcata 499
Query: 300 aatagaaagcaattgcttttctagctcagat 330
||||||||||| |||||||||||||||||||
Sbjct: 500 aatagaaagcacttgcttttctagctcagat 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
