Query= MSMg01no076_l07.b1 MSMg01no076_l07.b1 CHROMAT_FILE:
MSMg01no076_l07.b1 PHD_FILE: MSMg01no076_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:47 2005
(388 letters)
>mm_chr16_25492510_25493296
Length = 787
Score = 719 bits (372), Expect = 0.0
Identities = 384/388 (98%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 1 catgctctcacattgagtgggacattttctccatctggacgcaggtgcttctccctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgctctcacattgagtgggacattttctccatctggacgcaggtgcttctccctatgg 260
Query: 61 gtgaaggaatcaaatcaattgatctctactagttctcaaagtcctaaagtaacaaagtac 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gtgaaggaatcaaatcaattgatctctattagttctcaaagtcctaaagtaacaaagtac 320
Query: 121 taatgtaatcctttgagcttctattctttcatgtctctccagggcatttagaagttatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatgtaatcctttgagcttctattctttcatgtctctccagggcatttagaagttatca 380
Query: 181 cgaaataatattttggaaacattgattctgtaatttttttttacttctgatgcttcctgt 240
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tgagataatattttggaaacattgattctgtaatttttttt-acttctgatgcttcctgt 439
Query: 241 ctgaatcctcttccattcagcttgataagcatccttcacgtggtcccaaggaggaaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgaatcctcttccattcagcttgataagcatccttcacgtggtcccaaggaggaaatga 499
Query: 301 tgccatagcaagaataaagtagaaaatagtactggcccttggatttgaggtttgaatgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgccatagcaagaataaagtagaaaatagtactggcccttggatttgaggtttgaatgcc 559
Query: 361 cttttaggcttgaatgggattcctgagc 388
||||||||||||||||||||||||||||
Sbjct: 560 cttttaggcttgaatgggattcctgagc 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 787
Length adjustment: 9
Effective length of query: 379
Effective length of database: 778
Effective search space: 294862
Effective search space used: 294862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_l07.g1 MSMg01no076_l07.g1 CHROMAT_FILE:
MSMg01no076_l07.g1 PHD_FILE: MSMg01no076_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:47 2005
(108 letters)
>mm_chr16_25662233_25662741
Length = 509
Score = 188 bits (97), Expect = 1e-52
Identities = 106/109 (97%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 1 ttttttggaggaaa-tgggcttgtctctttccagtgttctgctaccctattattcacctg 59
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 309 ttttttggaggaaagtgggcttgtctctttccagtgttctgctactctattattcagctg 250
Query: 60 ccaggcttttgagatgaattatcaatagatgttagactagtgtgaatgt 108
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccaggcttttgagatgaattatcaatagatgttagactagtgtgaatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 108
Length of database: 509
Length adjustment: 8
Effective length of query: 100
Effective length of database: 501
Effective search space: 50100
Effective search space used: 50100
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
