Query= MSMg01no078_b22.b1 MSMg01no078_b22.b1 CHROMAT_FILE:
MSMg01no078_b22.b1 PHD_FILE: MSMg01no078_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:20 2005
(642 letters)
>mm_chr16_61102242_61103282
Length = 1041
Score = 1183 bits (612), Expect = 0.0
Identities = 633/640 (98%), Gaps = 2/640 (0%)
Strand = Plus / Minus
Query: 4 ggaa-tcactttgtataccagcctggcctcgaactcagaaatctacctgccgctgcctct 62
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 ggaattcactttgtagaccagcctggcctcgaactcagaaatctacctgccgctgcctct 886
Query: 63 gcctccagagtgctgggattaaggcatgcgccaccagacccagcattaatggttttatga 122
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 885 gcctccagagtgctgggattaaggcatgtgccaccagacccagcattaatggttttatga 826
Query: 123 ttgaagacatctaaacaagatgagcccaaacctcaataacaaatatgtatgtaatatatt 182
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttgaagacatctaaacaagttgagcccaaacctcaataacaaatatgtatgtaatatatt 766
Query: 183 ttctattatctcacacttgatgacaccagttgctacgtttatactttacctttagaattt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ttctattatctcacacttgatgacaccagttgctacgtttatactttacctttagaattt 706
Query: 243 gtatcattaaattttacaaaagcaatattgcaaaactgtttagacctttatactgagaat 302
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 705 gtatcattaaattttacaaaagcaatattgcaaaactgtttatacctttatactgagaat 646
Query: 303 gccattgaatctatatcttggaaagagatataaaacctgtgactcatcactatcagcatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gccattgaatctatatcttggaaagagatataaaacctgtgactcatcactatcagcatt 586
Query: 363 ccattaatattccaacatattttttagtttactataaatagtatcttagattttacctct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ccattaatattccaacatattttttagtttactataaatagtatcttagattttacctct 526
Query: 423 tattatagtttgatgctttgttgctctgttcaacactgatcaaaagagtttgtagtgaag 482
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 525 tattatagtttgatgctttgttgctctgttcaacactgatcaaaagag-ttgtagtgaag 467
Query: 483 aaagctttcaggcttctaattcaacaccttcctcactgagggaagaaaagaactaagata 542
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 466 aaagctttcaggcttctaattcaataccttcctcactgagggaagaaaagaactaagata 407
Query: 543 ctatagcagagaccataaagtacagttttgtcttaaggttctctaaccttatcttgatta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ctatagcagagaccataaagtacagttttgtcttaaggttctctaaccttatcttgatta 347
Query: 603 cctcatcttcctttcttacattgctcaggcattccttccc 642
||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cctcatcttcctttcttacattgctcaggcattccttccc 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_b22.g1 MSMg01no078_b22.g1 CHROMAT_FILE:
MSMg01no078_b22.g1 PHD_FILE: MSMg01no078_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:20 2005
(602 letters)
>mm_chr16_60948930_60949931
Length = 1002
Score = 1164 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Plus
Query: 1 agtacctatcaccaatttatacttcaaacacacaacacttacatgaaagggtcaggaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtacctatcaccaatttatacttcaaacacacaacacttacatgaaagggtcaggaaat 260
Query: 61 attgtaaaagaggaaggaggctatgtcacacttgatgattaccaccaattgacagtgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtaaaagaggaaggaggctatgtcacacttgatgattaccaccaattgacagtgttt 320
Query: 121 tgtatcaatgataggcaattaagattttttctaaatacattatttaataccaaataattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatcaatgataggcaattaagattttttctaaatacattatttaataccaaataattt 380
Query: 181 tactgctattttagtaatgtattgagagttatcataatttcaaaaactaaacttatttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactgctattttagtaatgtattgagagttatcataatttcaaaaactaaacttatttgc 440
Query: 241 aatataatcatattcacatactataacaggtcaaaagaattattcaaaatattaacatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatataatcatattcacatactataacaggtcaaaagaattattcaaaatattaacatga 500
Query: 301 cagacataaggcatgattgagaatttgcatagaagccacaaaatatacacatttcatact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagacataaggcatgattgagaatttgcatagaagccacaaaatatacacatttcatact 560
Query: 361 tttacaagcagcaaaaattgctttttattgttttccagttgccttataaaattgctaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttacaagcagcaaaaattgctttttattgttttccagttgccttataaaattgctaaga 620
Query: 421 cagagttgtagtagtgacattcctgcttgtatccctcttttcacatagatcctgcaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagagttgtagtagtgacattcctgcttgtatccctcttttcacatagatcctgcaccaa 680
Query: 481 taaggacaaagcatggtgacacacgcctttaatcccagcacttgggaggcagaggcaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaggacaaagcatggtgacacacgcctttaatcccagcacttgggaggcagaggcaggc 740
Query: 541 agatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggcta 800
Query: 601 ta 602
||
Sbjct: 801 ta 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
