Query= MSMg01no078_h10.b1 MSMg01no078_h10.b1 CHROMAT_FILE:
MSMg01no078_h10.b1 PHD_FILE: MSMg01no078_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:48 2005
(591 letters)
>mm_chr16_47435812_47436802
Length = 991
Score = 1089 bits (563), Expect = 0.0
Identities = 581/587 (98%)
Strand = Plus / Minus
Query: 5 gaattcttaatgctgctttcctctactttctttcataaccaacccattcttaacacctct 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gaattcttaatgctgatttcctctactttctttcataaccaacccattcttaacacctct 732
Query: 65 gataaatgcctagttgacacttactgattgagtattccagtaacagaaaatattctaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gataaatgcctagttgacacttactgattgagtattccagtaacagaaaatattctaaaa 672
Query: 125 gattctctaacttttcttgacaattctttagcatatttagatgttttgtatctttttttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gattctctaacttttcttgacaattctttagcatatttagatgttttgtatctttttttt 612
Query: 185 cttttagacagactcataaattaagaaaaaaatcaaaatctgataaaagtattttatatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cttttagacagactcataaattaagaaaaaaatcaaaatctgataaaagtattttatatt 552
Query: 245 cccaggctaaagcagtatattggagtgaaattagcatagaaaatgagaatatcctaatac 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 551 cccaggctaaagcagtatattggaatgaaattagcatagaaaatgagaatatcctaatac 492
Query: 305 atcttaaagaaaaaaatttgatcagtttaacctacagagctaataaagtcttaaattctt 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atcttaaagaaaaaaatttgaccagtttaacctacagagctaataaagtcttaaattctt 432
Query: 365 aacaaagagaaaagggttgtatcttgctatgtcagtcatgaagaacacatgttatcaaag 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 aacaaagagaaaaggggtgtatcttgctatgtcagtcatgaagaacacatgttattaaag 372
Query: 425 aggtaaaacactgcaatataatgagaacagatgagcctaatacattaatagtgccaatag 484
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 371 aggtaaaacactgcaatataataagaacagatgagcctaatacattaatagtgccaatag 312
Query: 485 aagggaatctctgaatgatagagtgagaaaatcagacagcacttgagtacctacctggag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aagggaatctctgaatgatagagtgagaaaatcagacagcacttgagtacctacctggag 252
Query: 545 tagacctaatctttaagtccaataaagagaaagtctatatattacaa 591
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tagacctaatctttaagtccaataaagagaaagtctatatattacaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_h10.g1 MSMg01no078_h10.g1 CHROMAT_FILE:
MSMg01no078_h10.g1 PHD_FILE: MSMg01no078_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:48 2005
(595 letters)
>mm_chr16_47364518_47365509
Length = 992
Score = 992 bits (513), Expect = 0.0
Identities = 572/595 (96%), Gaps = 7/595 (1%)
Strand = Plus / Plus
Query: 1 agagattttcaatggtcatatccactgctgacctccatgaatcaagcattatttcctcag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 agagattttcaatggtcatatccactgctgatctccatgaatcaagcattatttcctcag 260
Query: 61 agaaaactctactgtgtgataaatcactcacctcaatttctcctgagttgttgaagcaag 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaactctgctgtgtgataaatcactcacctcaatttctcctgagttgttgaagcaag 320
Query: 121 agtgtgtgaatatgtgactgctttacatttctgctgaccccatatcctcttcttgaactg 180
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 321 agtgtgtgaatatgtgactgctttacatctctgctgaccccatatc---ttcttgaactg 377
Query: 181 ttgaacaaattgttggagctggtcttcaacaagataggaagaacatccaaatgagttttc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 378 ttgaacaaattgttggagctggtcttcaacaatataggaagaacatccaaatgagttttc 437
Query: 241 aataattgaacaatatgtaaaattatgggtttgtttcaactttaaaacagatgaagtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aataattgaacaatatgtaaaattatgggtttgtttcaactttaaaacagatgaagtcaa 497
Query: 301 tagcctttctgtacccaaaggataaacaggctgagaaagaaattaaggaaactacaccct 360
| || |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 tggcttttctgtacccaaaggataaacaggctgagaaagaaattagggaaactaca---- 553
Query: 361 tctcaatagtcacaaataatataaaataccttggtatgactctaactaaggaagtgaaag 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 554 tctcaatagtcacaaataatataaaataccttggtgtgactctaactaaggaagtgaaag 613
Query: 421 ttctgtatgataagaacttcaagtctctgaagaaagaaattaaagaagatctcagaagat 480
||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 614 ttctgtatgataaaaacttgaagtctctgaagaaagaaataaaagaagatctcagaagat 673
Query: 481 ggaaagatctatgctcatggattggcaggatcaatatagtaaaaatggctatcctgccaa 540
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 674 ggaaagatctatgctcatggattgacagaatcaatatagtaaaaatggctatcctgccaa 733
Query: 541 aagcaatctacagaatcaatgcaatccccatcaaaattctaactcagttcttcaa 595
|||||||||||||| |||||||||| |||||||||||| ||||||||||||||||
Sbjct: 734 aagcaatctacagattcaatgcaatacccatcaaaattataactcagttcttcaa 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 992
Length adjustment: 10
Effective length of query: 585
Effective length of database: 982
Effective search space: 574470
Effective search space used: 574470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
