Query= MSMg01no078_n22.b1 MSMg01no078_n22.b1 CHROMAT_FILE:
MSMg01no078_n22.b1 PHD_FILE: MSMg01no078_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:19 2005
(627 letters)
>mm_chr16_25735980_25737006
Length = 1027
Score = 1131 bits (585), Expect = 0.0
Identities = 616/627 (98%), Gaps = 5/627 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttctctc--tcaa-gactaagtcagaatctcactgcattctacaaagtatt 60
||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctttt-tc-cattcaaagactaagtcagaatctcactgcattctacaaagtatt 260
Query: 61 ctccttcgcctggatctccaggcaaccagtcagggatttgatgagtagaatatgccacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccttcgcctggatctccaggcaaccagtcagggatttgatgagtagaatatgccacag 320
Query: 121 gaaagaaggctgagtctttccatggggaaaactctgcaggtggttgccatggctactgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagaaggctgagtctttccatggggaaaactctgcaggtggttgccatggctactgga 380
Query: 181 ctgtttgaaacatggtgatgaagcaagacagaggagagagaaagcagagacctgtatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtttgaaacatggtgatgaagcaagacagaggagagagaaagcagagacctgtatttg 440
Query: 241 aatcttgtctctgtcctttgaaagctaatcttggtaactaatagcactttcccatgtcct 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 aatcttgtctctgtcctttgaaagctaatcttgggaactaatagcactttcccatgtcct 500
Query: 301 ctgccacaaagtgactgaaacaaattcttccttggactattattaacactgtaagaaata 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 ctgccacaaagtgactgaaacaaattcttccttggactattattaacactgtaagaaaca 560
Query: 361 atgcctactaaagaggagcaagacactaaagcatacaccatcagcaggcagtgtgcgctg 420
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 atgcctattaaagaggagcaagacactaaagcatacaccatcagcaggcagtgtgcactg 620
Query: 421 accattgtgctttctgcacagtctcgcatccactcctttctgtctatggagtagatgcca 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 accattgtgctttctgcacagtctagcatccactcctttctgtctatggagtagatgcca 680
Query: 481 tcatcacttccactttgaggggacacttaggttgagtgaccgttactcccagactgttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatcacttccactttgaggggacacttaggttgagtgaccgttactcccagactgttga 740
Query: 541 gggctacagcagaaggatcataacagcatccatatcctgcgtccagaaactcagtttact 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 gggctacagcagaaggatcataacagcatccatatcctgtgtccagaaactcagtttact 800
Query: 601 ggtacagagttctttgggtatcagacc 627
|||||||||||||||||||||||||||
Sbjct: 801 ggtacagagttctttgggtatcagacc 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_n22.g1 MSMg01no078_n22.g1 CHROMAT_FILE:
MSMg01no078_n22.g1 PHD_FILE: MSMg01no078_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:19 2005
(246 letters)
>mm_chr16_25864957_25865602
Length = 646
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 agtgccaacctgagacaggagagaaagaaacatacatgtctatatacatgatgtaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgccaacctgagacaggagagaaagaaacatacatgtctatatacatgatgtaacatg 326
Query: 61 taacatggcttttgctctgccctccagaactccacttcaaatggcatgtttccttctagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taacatggcttttgctctgccctccagaactccacttcaaatggcatgtttccttctagg 266
Query: 121 aagggatattgtaaaatcccctggagagctctcttagtcttgctttctagaaagcgtcaa 180
||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 265 aagggatattgtaaaatcccctggagagctctcacagtcttgctttttagaaggcgtcaa 206
Query: 181 actaatgtttctttctgttttgtttgttgttgttgggatttttgttttgttttgtttttg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 actaatgtttctttctgttttgtttgttgttgttgggatttttgttttgttttgtttt-g 147
Query: 241 tttt 244
||||
Sbjct: 146 tttt 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
