Query= MSMg01no078_o06.b1 MSMg01no078_o06.b1 CHROMAT_FILE:
MSMg01no078_o06.b1 PHD_FILE: MSMg01no078_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:21 2005
(431 letters)
>mm_chr16_23245465_23246295
Length = 831
Score = 787 bits (407), Expect = 0.0
Identities = 422/431 (97%), Gaps = 8/431 (1%)
Strand = Plus / Plus
Query: 5 ggaattcaactta----ccctcttttggagacaccgataatgagaccttaatgcatctcc 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcaacttaggagc----ttttggagacaccgataatgagaccttaatgcatctcc 260
Query: 61 atcaccagagctgtgtccgcgtggtcctcattccttcccattaccatggatgctgctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaccagagctgtgtccgcgtggtcctcattccttcccattaccatggatgctgctgtg 320
Query: 121 tcttagtcaccgttctattgctcttaagagcaacactgtgaccttggcaactataaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttagtcaccgttctattgctcttaagagcaacactgtgaccttggcaactataaaaag 380
Query: 181 aaagcagttagagttaggagcttgctcatagtttcagattttaagccttacatcatgtca 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagcatttagagttaggagcttgctcatagtttcagattttaagccttacatcatgtca 440
Query: 241 gggagcacggtggcaggcaagtatgttggagaagtgtgtaagctacattctgacctgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggagcacggtggcaggcaagtatgttggagaagtgtgtaagctacattctgacctgtag 500
Query: 301 gccaagagagaaaagaccctgggcctggcttggagatttgaaacctcaaagcccaccgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccaagagagaaaagaccctgggcctggcttggagatttgaaacctcaaagcccaccgtc 560
Query: 361 agtgacacacttcctccacgccccctaatccttccaataccatcctagagttctacttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgacacacttcctccacgccccctaatccttccaataccatcctagagttctacttcc 620
Query: 421 tagtgactaag 431
|||||||||||
Sbjct: 621 tagtgactaag 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_o06.g1 MSMg01no078_o06.g1 CHROMAT_FILE:
MSMg01no078_o06.g1 PHD_FILE: MSMg01no078_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:21 2005
(361 letters)
>mm_chr16_23397294_23398054
Length = 761
Score = 667 bits (345), Expect = 0.0
Identities = 357/361 (98%)
Strand = Plus / Minus
Query: 1 ttttttgtttgtttgttgttttgttttttattttctttcttggctgaggtgaggagctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttttgtttgtttgttgttttgttttttattttctttcttggctgaggtgaggagctcc 502
Query: 61 gtctctatttatagagggtctccttctgtatatttaaagggtcctatgaacatgtgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctctatttatagagggtctccttctgtatatttaaagggtcctatgaacatgtgcctt 442
Query: 121 ggcaatgtatacctcctaacggtgtatacagtgatgactttgcccttcctccagtgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcaatgtatacctcctaacggtgtatacagtgatgactttgcccttcctccagtgaagt 382
Query: 181 gcctggattaatgccagaaactccgccctttgtgctaacattctgcagccaaggaactgg 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctggattaatgccagaaactctgccctttgtgctaacattctgcagccaaggaactgg 322
Query: 241 gcccacgctgtcccatccaaggtgatgtctgtggtcctaccatacctgacttcatcttga 300
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gcccacactgtcccatccaaggtgatgtctgtggtcctacaatacctgacttcatcttga 262
Query: 301 acaaaattgttcctcctcatcttcttgaagcaggacatctctttagtcaggcttgatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 acaaaattgttcctcctcatcttcttgaagcaggacatctctttagtcaggtttgatgga 202
Query: 361 c 361
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
