XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAATTCTT
TAGCTCCGACCTCATTTTTTAATTGGGCTATTTGACTTTTTGAGGTTAGC
TTCTTGAAAACCTTGCACATTTGGGGCATTAGCCCTTTATTGGGTGTGGG
GTTAGTAAAGATGTTTTTCCCATTCGGCAGGATGCCGATTTATCCTTTTG
AATGTGTCTTTTTGCCATAAAGAAGCTTTTCAGTTTCACGAGGTCCCATT
TACCAATTACTGATCTTAAAGCCTGAGCCATTTAGGAAATGAGTTCTCTT
TAGAAAATTTCCCCTTGTGCCAATGAGTTCGAGGCTCTTTCCCCCTTTCT
CTTCTATGAAAAAAATTAGATGATAATCTCATTAGTTGCTGAAAAAGTAT
CTTACAAAATACAACACTCCTTCATTTTGAAAGTATTGGAGAGATCAGTA
TTTCAAGGCCCTTCACTAAACATAATAAAAGAGATATAAACCAAACCATC
AGCCAATGTCAAATTAAATGGAGAGATACTTGAAGAAATTCCACTAAAAT
CAGGAACAAGACAAGGATGCCCACTCCATATCTATTCAATATCATACTTG
AAGTTCTAGCTAGACCAGTAAGAAAACAAGAGGAGATCAAGAGGTGGTTG
TTTATGGGGTGGATTTCCAGGTGGGGCAGTCTCTGGATGGTCATTTCTTA

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAATATATGAACCTATGAGGTCATTCTCATTC
AAAATATTACAGGCCAGTAACTGCAGTCTCTCCTAACCCCATCCCTTGGA
CACTCCAAACTGTAGGACAACAATTTGGACTCATCAGAACAAAGGAAATT
ATTAGTATTTATCTTTATGATTGACTAGAAAAGTGTAACACTACAAGCTA
TGATAAAGTGACTGTGTATGGTCCAAGCATTGTAGTCTGAAACTATTTCA
TTCTCTATTGACTAGACTATCTATGTCAGCCCAAGCCACTGCTGTTCACA
CTTCCCTTAATATAATCACCCATCACAACAAGATTGTCAGAAAAAGTGGG
GGTGGCTCAGTTGTTGCCTTCAGGATGCAAGACCCTTACTCAGTCACATA
TTGCAACTAGATTTCTCCAGGCTAACTCATAGTCATAAAACTAGATAGCA
ATGATAGCTAGAAGCCAATGTTTAGAAATCTCGAGGTGCAAGTGAAGATA
AATTAAAGAGAAAGTAAAAAAAAATTATGAAAGAAGTTTATAAATTATTC
TTTATGTGCTATTGTTAGATGGAGATATAAGAAATAAATTTGCATAGCAT
CATACTGACTGGAATTTGCAAATAGATATGAAGCATCTGAATCTATATGC
AT

Query= MSMg01no079_c04.g1 MSMg01no079_c04.g1 CHROMAT_FILE:
MSMg01no079_c04.g1 PHD_FILE: MSMg01no079_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:40 2005
         (607 letters)



>mm_chr16_46903363_46904368
          Length = 1006

 Score = 1120 bits (579), Expect = 0.0
 Identities = 600/607 (98%), Gaps = 1/607 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatatatgaacctatgaggtcattctcattcaaaatattacaggccagtaactgcagtct 60
           |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aatatacgaacctatgaggtcattctcattcaaaatattacaggccagtaaccgcagtct 260

                                                                       
Query: 61  ctcctaaccccatcccttggacactccaaactgtaggacaacaatttggactcatcagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcctaaccccatcccttggacactccaaactgtaggacaacaatttggactcatcagaa 320

                                                                       
Query: 121 caaaggaaattattagtatttatctttatgattgactagaaaagtgtaacactacaagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaggaaattattagtatttatctttatgattgactagaaaagtgtaacactacaagct 380

                                                                       
Query: 181 atgataaagtgactgtgtatggtccaagcattgtagtctgaaactatttcattctctatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgataaagtgactgtgtatggtccaagcattgtagtctgaaactatttcattctctatt 440

                                                                       
Query: 241 gactagactatctatgtcagcccaagccactgctgttcacacttcccttaatataatcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactagactatctatgtcagcccaagccactgctgttcacacttcccttaatataatcac 500

                                                                       
Query: 301 ccatcacaacaagattgtcagaaaaagtgggggtggctcagttgttgccttcaggatgca 360
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctatcacaacaagattgtcagaaaaagtgggggtggctcagttgttgccttcaggatgca 560

                                                                       
Query: 361 agacccttactcagtcacatattgcaactagatttctccaggctaactcatagtcataaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agacccttactcagtcacatattgcaactagatttctccaggctaactcatagtcataaa 620

                                                                       
Query: 421 actagatagcaatgatagctagaagccaatgtttagaaatctcgaggtgcaagtgaagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 621 actagatagcaatgatagctagaagccaatgtttagaaatctcgaggtgcaagtgaagaa 680

                                                                       
Query: 481 aaattaaagagaaagtaaaaaaaaattatgaaagaagtttataaattattctttatgtgc 540
           ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 aaattaaagcgaaagtaaaaaaaa-ttatgaaagaagtttataaattattctttatgtgc 739

                                                                       
Query: 541 tattgttagatggagatataagaaataaatttgcatagcatcatactgactggaatttgc 600
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tattgttagacggagatataagaaataaatttgcatagcatcatactgactggaatttgc 799

                  
Query: 601 aaataga 607
           |||||||
Sbjct: 800 aaataga 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1006
Length adjustment: 10
Effective length of query: 597
Effective length of database: 996
Effective search space:   594612
Effective search space used:   594612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)