Query= MSMg01no079_e17.b1 MSMg01no079_e17.b1 CHROMAT_FILE:
MSMg01no079_e17.b1 PHD_FILE: MSMg01no079_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:53 2005
(683 letters)
>mm_chr16_74079103_74080189
Length = 1087
Score = 1096 bits (567), Expect = 0.0
Identities = 578/583 (99%), Gaps = 4/583 (0%)
Strand = Plus / Minus
Query: 5 gaattcaactaagatcctgtatatcagacctttcaggtgagacttggcaaggcaagaagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaattcaactaagatcctgtatatcagacctttcaggtgagacttggcaaggcaagaagc 524
Query: 65 ccaaactt---ctatcattttggttgtagcc-aacaaaagaaacacacaaacaaaaaaca 120
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 523 ccaaacttctcctatcattttggttgtagccaaacaaaagaaacacacaaacaaaaaaca 464
Query: 121 attatgtggaaaatctatttgtcttactagaaagacaagggctattgtttaatagaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attatgtggaaaatctatttgtcttactagaaagacaagggctattgtttaatagaggtc 404
Query: 181 atatttactcaagtaatcattactgtgaatgtccttttgtcactatgaggtatgacaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atatttactcaagtaatcattactgtgaatgtccttttgtcactatgaggtatgacaatt 344
Query: 241 agtcaagagacagtttccaggcaacagtatatgtataaaatcttcactcatcttcactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agtcaagagacagtttccaggcaacagtatatgtataaaatcttcactcatcttcactca 284
Query: 301 tattatttaatgattttagaatagatatggccactatttcatatataactgagtaaacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tattatttaatgattttagaatagatatggccactatttcatatataactgagtaaacct 224
Query: 361 atgtgctcaacaaaatcagttataaattaatatatctatgtatattaaattaatttttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atgtgctcaacaaaatcagttataaattaatatatctatgtatattaaattaatttttct 164
Query: 421 tcttatatcagacattatatgatataataatttcaagctttgttatttcatattaagaaa 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tcttatatcagacattatataatataataatttcaagctttgttatttcatattaagaaa 104
Query: 481 ctaatacagtaaaacattccttttaatatgtagcactaagaaatgtaaaaagaaactgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctaatacagtaaaacattccttttaatatgtagcactaagaaatgtaaaaagaaactgtt 44
Query: 541 gttcttgagaaatttacattttaaggcatccatgttctagaga 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 gttcttgagaaatttacattttaaggcatccatgttctagaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1087
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1077
Effective search space: 724821
Effective search space used: 724821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_e17.g1 MSMg01no079_e17.g1 CHROMAT_FILE:
MSMg01no079_e17.g1 PHD_FILE: MSMg01no079_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:53 2005
(593 letters)
>mm_chr16_74006322_74007314
Length = 993
Score = 1093 bits (565), Expect = 0.0
Identities = 586/593 (98%)
Strand = Plus / Plus
Query: 1 attatcaaagaaacattgatctagattttgtgctaaccccaaatataacagataagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatcaaagaaacattgatctagattttgtgctaaccccaaatataacagataagagga 260
Query: 61 ctcattctgaggcattggcgacattccaaatgactaagtgtaatatggtgaatctttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 ctcattctgaggcattggcgacattccaaatgactaagtgtaatatggtaaatctttttc 320
Query: 121 tctagtgagaagtgtgcaattgatgaaattcaaaatactttctacaacccatatctaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctagtgagaagtgtgcaattgatgaaattcaaaatactttctacaacccatatctaatc 380
Query: 181 aaacttatatagaatctcaaaatgcagcaatgcatgcgtacaattccaattgtgatttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacttatatagaatctcaaaatgcagcaatgcatgcgtacaattccaattgtgatttgc 440
Query: 241 atggtgaaataatcttgttgtcactttaaaactcaactgtctctcctaagtcatctttgg 300
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 441 atggtgaaataatcttgttgtcactttaaaactcaattggctctcctaagtcatctttgg 500
Query: 301 acagattctcacttgtaagttctcactgattccaaattgggcttccccgaagaacacaaa 360
||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 501 acagattctcactcgtaagttctcaatgattccaaattgggcttccctgaagaacacaaa 560
Query: 361 gaagcttcatttggaataacagagtgattgttttctgaagtcttacgtgtgtctgaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagcttcatttggaataacagagtgattgttttctgaagtcttacgtgtgtctgaattt 620
Query: 421 gaatttgattcttactttcccttaaaatcctttattagaagaatccaggcacttttctct 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaagttgattcttactttcccttaaaatcctttattagaagaatccaggcacttttctct 680
Query: 481 agactatgtgtttatttgaaaatatattcccctatttgtattagaattagaacataattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agactatgtgtttatttgaaaatatattcccctatttgtattagaattagaacataattt 740
Query: 541 tctcctctctgtatgatatttgttttagaatactctttatgcaatctctaaga 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctcctctctgtatgatatttgttttagaatactctttatgcaatctctaaga 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
