Query= MSMg01no079_n21.b1 MSMg01no079_n21.b1 CHROMAT_FILE:
MSMg01no079_n21.b1 PHD_FILE: MSMg01no079_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:36 2005
(491 letters)
>mm_chr16_25398923_25399813
Length = 891
Score = 781 bits (404), Expect = 0.0
Identities = 461/486 (94%), Gaps = 11/486 (2%)
Strand = Plus / Minus
Query: 1 atggatgcatctggaggatatcatcctgagtgaggtaacctaatcacaaaagaacacacg 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 801 atggatgcatctggaggatatcatcctgagtgaggtaacccaatcacaaaagaacacaca 742
Query: 61 tgatat-cactcactggtaagcagatattattgcagaagcttggaatactcaagatacaa 119
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 tgatatgcactcactggtaagcagatattagcgcagaagcttggaatactcaagatacaa 682
Query: 120 ttcacaaaccacataaaactcatgaagaaggaagacaaaatccctccatccttcttagac 179
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 ttcacaaaccacataaaactcgtgaagaaggaagacacaatccctccatccttcttagac 622
Query: 180 tggggaataaaccacccatgactttagtatctcttgaacactggtgctttgcatttctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 tggggaataaaccacccatgactttagtatctcttgaacactggtgcttcgcatttctcc 562
Query: 240 ccagatccaaagcaacggattgtaaaaagagctgatcccttctcagagtcctttttttcc 299
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 561 ccagatccaaagcaacggattggaaaaagagctgatcccttcttagagtcctttttttcc 502
Query: 300 agtcctagtgtcagttcctcactggggcaggttttgccttcgtggaatggatagaactaa 359
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tgtcccagtgtcagttcctcactggggcaggttttgcctttgtggaatggatagaactaa 442
Query: 360 caacttatgcttccatgttccatcactgggttactcttcctttttctttctttctttctt 419
|||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 441 caacttatgcttacatgttccgtcactgggttactcttccttttt----------ttctt 392
Query: 420 tctttctttctttctttctttctttctttctttctttctttctttctttctttctttttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tctttctttctttctttctttctttctttctttctttctttctttctttctttctttttt 332
Query: 480 tttccc 485
||||||
Sbjct: 331 tttccc 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_n21.g1 MSMg01no079_n21.g1 CHROMAT_FILE:
MSMg01no079_n21.g1 PHD_FILE: MSMg01no079_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:36 2005
(436 letters)
>mm_chr16_25309376_25310211
Length = 836
Score = 797 bits (412), Expect = 0.0
Identities = 430/436 (98%)
Strand = Plus / Plus
Query: 1 agcctgtggtccctccccagcagatctgtgtttttcgccagcccctccccctccccctat 60
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 201 agcctgtggtccctccccagcagacctgtgtttttcgccagccccgccccctcccgctat 260
Query: 61 tctgaaatgaaggcacaggtgcagagcagagggctcctctgactcaggaagggctgggag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tctgaaatgaaggcacaggtgcagagcagagggctcctctgtctcaggaagggctgggag 320
Query: 121 agatgagaccctccttctgctcatcctgccctaggactcagcatccttgctagcccgcta 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 agatgagaccctccttctgctcatcctgccccaggactcagcatccttgctagcccgcta 380
Query: 181 tcactaatgcacaaaatgtgaaattgtggagaatcatttgccaatattcttatctgcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcactaatgcacaaaatgtgaaattgtggagaatcatttgccaatattcttatctgcact 440
Query: 241 ggcacagaagcgagcttgctggagagctgcgaggtgttggagtattgttgtttatccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcacagaagcgagcttgctggagagctgcgaggtgttggagtattgttgtttatccacc 500
Query: 301 acacatccctcggctgcttgcacagagactcagaaaggttgcacacataaattcacataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacatccctcggctgcttgcacagagactcagaaaggttgcacacataaattcacataa 560
Query: 361 attacctttacaaaatgtcagaattaaaagtggatttttattttggggacatgcctggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attacctttacaaaatgtcagaattaaaagtggatttttattttggggacatgcctggtg 620
Query: 421 aatggtaaccccttcg 436
|||| |||||||||||
Sbjct: 621 aatgttaaccccttcg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
