Query= MSMg01no083_g01.b1 MSMg01no083_g01.b1 CHROMAT_FILE:
MSMg01no083_g01.b1 PHD_FILE: MSMg01no083_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:05 2005
(317 letters)
>mm_chr16_34973093_34973808
Length = 716
Score = 551 bits (285), Expect = e-161
Identities = 306/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 5 gaattctacagccacgtgggagccttgatattatttaatctaaataccctttggctggta 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattctacagccaagtgggagccttgatattatttaatctaaataccctttggctggta 457
Query: 65 ggacctaacaattaaaaataaaaaatctcatttcagcagtcagagagcttgaaggctggc 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 456 ggacctaacaattaaaaataaaaaatctcatttcagtagtcagagagcttgaaggctggc 397
Query: 125 ttcctgagaattagaaaggacttgatccacagcagctacgtagatgctaaaaatgctcca 184
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 396 tttctgagaattagaaaggacttgatccacagcagctacgtagatgct-aaaatgctcca 338
Query: 185 gggctacttttaagtggaaaacaaaccagaatacaggaaaaagtcaacccatcactcttt 244
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 337 gggctacttttaagtggaaaacaaaccagaatacagggaaaagtcaacccatcactcttt 278
Query: 245 taatagccgtctatggtcgagcactgagcctcacagaacaattctacctaatcccacagc 304
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 taatagcagtctatggccgagcactgagcctcacagaacaattctacctaatcccacagc 218
Query: 305 atccactgtgtgt 317
|||||||||||||
Sbjct: 217 atccactgtgtgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_g01.g1 MSMg01no083_g01.g1 CHROMAT_FILE:
MSMg01no083_g01.g1 PHD_FILE: MSMg01no083_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:05 2005
(274 letters)
>mm_chr16_34793075_34793749
Length = 675
Score = 487 bits (252), Expect = e-142
Identities = 267/272 (98%), Gaps = 1/272 (0%)
Strand = Plus / Plus
Query: 1 ttgggtttttggacccatctcctcctctttca-catccctcaagaaagtgagagagagaa 59
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ttgggtttttggacccatctcctcctctttcaacatccctcaagaaagtgagagagagaa 260
Query: 60 ggaatgagccagaaagttctaattatccagtctgctgacattgtttttatctgcgccact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaatgagccagaaagttctaattatccagtctgctgacattgtttttatctgcgccact 320
Query: 120 gatattaaatgtggacagcattccatttaaatcacagtaccaagaacgacttctgcaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatattaaatgtggacagcattccatttaaatcacagtaccaagaacgacttctgcaaac 380
Query: 180 ttgggcctttgtccttttgcctgatgcggccaacgttcagttttccaccctgccttgctc 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ttgggcctttatccttttgcctgatgcggccaacgttcagttttccaccctgcctcgctc 440
Query: 240 tccctcagacttctgaaattccatagcaccca 271
|||||||||||||||||||||| ||||||||
Sbjct: 441 cccctcagacttctgaaattccacagcaccca 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 675
Length adjustment: 9
Effective length of query: 265
Effective length of database: 666
Effective search space: 176490
Effective search space used: 176490
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
