Query= MSMg01no083_i20.b1 MSMg01no083_i20.b1 CHROMAT_FILE:
MSMg01no083_i20.b1 PHD_FILE: MSMg01no083_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:18 2005
(199 letters)
>mm_chr16_29433664_29434258
Length = 595
Score = 315 bits (163), Expect = 9e-91
Identities = 189/199 (94%), Gaps = 4/199 (2%)
Strand = Plus / Plus
Query: 1 gcactatttgactaactggttgtctcttgtctcacgtgatatatgcttgatgaatagctt 60
||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 201 gcactatttgactaactggttgtctcttgcctcacgggatagatgcttgatgaatagctt 260
Query: 61 gcccttctgctgccaacagcctagagtgaagccttgacattggtacaatatttgtgaagc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 gcccttctgttgccaacagcctagagtgaagccttgacattggtacaatatgtgtgaagt 320
Query: 121 gatcccaccgtgtgtatctccaaggtctccccccccccgaccccacccccgtttccatga 180
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 321 gatcccaccgtgtgtatctccaaggtc-cccccccc---accccacccccgtttccatga 376
Query: 181 tatactatgcagctatacc 199
|||||||||||||||||||
Sbjct: 377 tatactatgcagctatacc 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 595
Length adjustment: 8
Effective length of query: 191
Effective length of database: 587
Effective search space: 112117
Effective search space used: 112117
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no083_i20.g1 MSMg01no083_i20.g1 CHROMAT_FILE:
MSMg01no083_i20.g1 PHD_FILE: MSMg01no083_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:19 2005
(235 letters)
>mm_chr10_113695561_113696195
Length = 635
Score = 416 bits (215), Expect = e-121
Identities = 230/235 (97%)
Strand = Plus / Plus
Query: 1 gtgaggtcatattacaaatgcctctcatctcagcatccagcccaaacatatgctgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgaggtcatattacaaatgcctctcatctcagcatccagcccaaacatatgctgctgct 260
Query: 61 gagaaagaccaagtcaatttgccttaggaaccaaatttatgagagtgccaattatttcaa 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaagaccaagtcaatttgccttaggaaccaaatttatgagagtgccaattatttcaa 320
Query: 121 caattaaggtaaatgatatcaaaggcaacataaacccctaaataacttaaaaattacatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattaaggtaaatgatatcaaaggcaacataaacccctaaataacttaaaaattacatt 380
Query: 181 gtgcaatgatcagatttatcaaggattttttcttcgtctctttttcttcactagt 235
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gtgcaatgatcagatttatcaaggaccgtttcttcgtctctttttcttcactagt 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
