Query= MSMg01no083_l15.b1 MSMg01no083_l15.b1 CHROMAT_FILE:
MSMg01no083_l15.b1 PHD_FILE: MSMg01no083_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:32 2005
(479 letters)
>mm_chr16_26685303_26686183
Length = 881
Score = 868 bits (449), Expect = 0.0
Identities = 470/477 (98%), Gaps = 2/477 (0%)
Strand = Plus / Minus
Query: 5 ggaatt-cataacaccctcagaaatgctaacataattcttaactac-aaatacagtaaat 62
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 ggaattccataacaccctcagaaatgctaacataattcttaactacaaaatacagtaaat 622
Query: 63 aggacatcatacttgttaagagctttgggagaataaatttccggctctttggaacagacc 122
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggacatcatacttgttaagagcattgggagaataaatttccggctctttggaacagacc 562
Query: 123 ctgtactctatgcctccatttcctagctattaaagatggtgtctaccttttggtgttgtg 182
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtactctaagcctccatttcctagctattaaagatggtgtctaccttttggtgttgtg 502
Query: 183 atatgcactgaacatggtaacacaagacttagcatacagatagcattactaaagtggaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 atatgcactgaacatggtaacacaagacttagcatacagatagcattactaaaatggaaa 442
Query: 243 ctattcaattcccccttttcagttgaacattcttcaacttgcaggtgttaagaaagcaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctattcaattcccccttttcagttgaacattcttcaacttgcaggtgttaagaaagcaat 382
Query: 303 agtgaaatggattataattatacattttttaagtctcaaagatgtatttctattattacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgaaatggattataattatacattttttaagtctcaaagatgtatttctattattacc 322
Query: 363 acagcacacattttttctaaaatcaagttacagaggtccactgagagatgaatttctgta 422
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtagacattttttctaaaatcaagttacagaggtccactgagagatgaatttctgta 262
Query: 423 gacatttgaggatgggtgcagaaggtagagaaaacaaaaccatcagggttcccatca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacatttgaggatgggtgcagaaggtagagaaaacaaaaccatcagggttcccatca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 881
Length adjustment: 10
Effective length of query: 469
Effective length of database: 871
Effective search space: 408499
Effective search space used: 408499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_l15.g1 MSMg01no083_l15.g1 CHROMAT_FILE:
MSMg01no083_l15.g1 PHD_FILE: MSMg01no083_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:32 2005
(421 letters)
>mm_chr16_26603657_26604477
Length = 821
Score = 768 bits (397), Expect = 0.0
Identities = 415/421 (98%)
Strand = Plus / Plus
Query: 1 cagtcttaagtatgaggtcttttaagatgaatcctggatgagccctctgagacatgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcttaagtatgaggtcttttaagatgaatcctggatgagccctctgagacatgtaaa 260
Query: 61 gtgataacatagacctccccactgctggcctatcatgcctaagatgtcactgcctcaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgataacatagacctccccactgctggcctatcatgcctaagatgtcactgcctcaccc 320
Query: 121 aaaacccagctgggttacaggtttgagagagctgtgaggatgccctgcaggctgcttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaacccagctgggttacaggtttgagagagctgtgaggatgccctgcaggctgcttgca 380
Query: 181 agtctccactcctcttccgggttagctggagctgtgtgttgctcgctttttccatgattg 240
|||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 agtctccagtcctcttctgggttagctggagctgtgtgttgcttgctttttccatgattg 440
Query: 241 cctgtccatttctctacacttctttcctatactgttacttcctttctgacttgtgatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgtccatttctctacacttctttcctatactgttacttcctttctgacttgtgatcca 500
Query: 301 tgtttaatctttcactctttaggacctgtttgttctcctgactttccttcactgtctcac 360
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 501 tgtttaatctttcactctttaggacttgtttgttctcctgattttccttcactgtctcac 560
Query: 361 acagagtgatacaatccagaggtttatcccagaagtactcagtactctatgtgtgtgtgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 acagagtgatacaatccagaggtttatcccagaagtactcagtactctatatgtgtgtgt 620
Query: 421 g 421
|
Sbjct: 621 g 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
