Query= MSMg01no086_j20.b1 MSMg01no086_j20.b1 CHROMAT_FILE:
MSMg01no086_j20.b1 PHD_FILE: MSMg01no086_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:25 2005
(363 letters)
>mm_chr16_9350143_9350905
Length = 763
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Minus
Query: 28 acacacacacacacacactgaagactggcctaagtgcagatacttcccttgacttctcct 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acacacacacacacacactgaagactggcctaagtgcagatacttcccttgacttctcct 522
Query: 88 gaccttttctaactaaccttggaaacagggcagagtgtgaatctgtgcccgagtcaggtg 147
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaccttttctatctaaccttggaaacagggcagagtgtgaatctgtgcccgagtcaggtg 462
Query: 148 ggcaggaagagcttccatggggttatctccaatgccaggtgctgagggcatagagcaagt 207
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 461 ggcaggaagagcttccatggggttatctccaatgtcaggtgctgagggcatagagcaagt 402
Query: 208 ctggaatccgctttccctgataagaaaatgattagcgcttgcactgtgcataaatagtgt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctggaatccgctttccctgataagaaaatgattagcgcttgcactgtgcataaatagtgt 342
Query: 268 tggagctagacgggccacgcaagaggacagatacaagctcatttgttggatgttcgggtg 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tggagctagacgggccacgcaagaggacagatacaagctcatttgttggatgttcgggtg 282
Query: 328 ggagaactctggtccagtacttctaggagtgatgat 363
||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggagaactctggtccagtacttctaggagtgatgat 246
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_j20.g1 MSMg01no086_j20.g1 CHROMAT_FILE:
MSMg01no086_j20.g1 PHD_FILE: MSMg01no086_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:26 2005
(174 letters)
>mm_chr16_9212692_9213264
Length = 573
Score = 292 bits (151), Expect = 8e-84
Identities = 162/166 (97%), Gaps = 1/166 (0%)
Strand = Plus / Plus
Query: 9 gacagngaccataggccacatgctggggactgggcagtgtgctctaatgcctatagtcac 68
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 209 gacagtgaccataggccacatgctggg-actgggcagtgtgctctaatgcctatagtcag 267
Query: 69 ttttctcactgaagcttcaatggtcccatcgtcgggcactattattcctttgtcccaatg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 268 ttttctcactgaagcttcaatggtcccatcgtcgggcactattattcctttgtcccagtg 327
Query: 129 agatagcagctaataaaaacagaattggatcgtggacctgaggtga 174
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agatagcagctaataaaaacagaattggatcgtggacctgaggtga 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 573
Length adjustment: 8
Effective length of query: 166
Effective length of database: 565
Effective search space: 93790
Effective search space used: 93790
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
