XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AAGCATGCACCATTCCAGAATCTAGAGAAAGTCATGGTCCTGGGAAAGAA
GCAGCCATGGGGAAAAGGGCTCTTCAGCCACATGAGCTTACTTAACAAGC
TGGCTCATGAGAGACAGATCTGCTTTCTATGTTCTGCCAAGATCTAGTTT
CCTAGCCTGTGAGGCTGAAGCACAGGCCAAACCATGAAATCTACCAAGGC
AATGATGCCACCCTGCTGGCCTCCTGGGAAGCAACACACTAGCTCTTTGC
ACCAGAGATGGTGTGCTAGCATTCTCCACATGGTTTTGAACCATGTTCAG
TTTTCTTTTGTGGTTAATCACATTTTATCATCTTGTAGACAGGGTGGTTC
ATTGTGTTGATTCATGACAGACACTTGGACTAACTCATTTTGGTAGGTAT
CTAAGTATCCGCTTATTGCTAGCATTCTAAATATTAGTCAAAAGCTTACC
TCCTTAACCAAAACTAACATTGTAACTGATCACATTGGCTTCTATGTCTC
ATTCAATAGAATCCTTGCATCAATTCAAGGCTAGCCTTGGTCATTATTTC
TGTGTCTTTTATAGTAGCATTTTTAAAGATGGTAACTGGTAACATAATTT
AACTCAACCTCTCTAAAAGGTTTATGTTGTCATCATAGGAATTTTATACA
TTATTACT

ACTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXACTTCTTTTGAAAATAAAACCAGAGGCCC
GAGCGATGACTTGGTGGTTAGGAGCACTTACGGCTCTTGCAGAGGATCTG
GGTTCATGTCCCAGTACCCGCATGACACCTCACAACCACCTCTAACTACA
GTTAGAATCCAATGCTTTCTTCTGTCCTTAGGCTCCTGCACACAAAAGGG
TGGGGGTGGGGATGGGGGTNGTCCCCCCCCACTNTTCTCTCCCTCCCCCC
CCTCTTTCTATTCTTTTTTTTTTTACCCCTTCCTTTCCCCCTCTCTCCCC
CACCTTTTTTTCCCCCCCCCCCCCCCCCCCCATCAATAACTTTATAACCC
TTTTTTATTCTCTCCCCAAAAAAACACCTACCTATTGCGCCCCCCTTCTT
TCCCTTCCTTCCGCTATCCATTACTTAATCATACTTTTCCTCTTTTATCC
CCCTTTTACATCCCCTCCTTTCTCTACTTTACCCACCCCAGTTCCTCTCC
TTCTCTCCTCCCCCTCTTCTTTATCTGCACTTACCCCACTCCCTCTTCTT
TATCCCCCCCCTACTCTCCCCCCCCTATTTTTTCCATCAACCAAAACAAA
ATCATTCCCTCTTGTCTTCCTTGTTTTACACTATACCCTCTTCCCCCCCT
TATTATTACCACACTCTTTTCTACCCTCG

Query= MSMg01no087_l19.b1 MSMg01no087_l19.b1 CHROMAT_FILE:
MSMg01no087_l19.b1 PHD_FILE: MSMg01no087_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:58 2005
         (637 letters)



>mm_chr16_87278611_87279647
          Length = 1037

 Score = 1178 bits (609), Expect = 0.0
 Identities = 630/637 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attccagaatctagagaaagtcatggtcctgggaaagaagcagccatggggaaaagggct 60
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 attccagaatccagagaaagtcatggtcctgggaaagaagcagccgtggggaaaagggct 260

                                                                       
Query: 61  cttcagccacatgagcttacttaacaagctggctcatgagagacagatctgctttctatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 cttcagccacatgagcttacttaacaagctggctcatgagagacagatctgctctctatg 320

                                                                       
Query: 121 ttctgccaagatctagtttcctagcctgtgaggctgaagcacaggccaaaccatgaaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgccaagatctagtttcctagcctgtgaggctgaagcacaggccaaaccatgaaatc 380

                                                                       
Query: 181 taccaaggcaatgatgccaccctgctggcctcctgggaagcaacacactagctctttgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taccaaggcaatgatgccaccctgctggcctcctgggaagcaacacactagctctttgca 440

                                                                       
Query: 241 ccagagatggtgtgctagcattctccacatggttttgaaccatgttcagttttcttttgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagagatggtgtgctagcattctccacatggttttgaaccatgttcagttttcttttgt 500

                                                                       
Query: 301 ggttaatcacattttatcatcttgtagacagggtggttcattgtgttgattcatgacaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttaatcacattttatcatcttgtagacagggtggttcattgtgttgattcatgacaga 560

                                                                       
Query: 361 cacttggactaactcattttggtaggtatctaagtatccgcttattgctagcattctaaa 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 cacttggactaactcattttggtaggtatctaagtatccgcttgttgctagcattctaaa 620

                                                                       
Query: 421 tattagtcaaaagcttacctccttaaccaaaactaacattgtaactgatcacattggctt 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattagccaaaagcttacctccttaaccaaaactaacattgtaactgatcacattggctt 680

                                                                       
Query: 481 ctatgtctcattcaatagaatccttgcatcaattcaaggctagccttggtcattatttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctatgtctcattcaatagaatccttgcatcaattcaaggctagccttggtcattatttct 740

                                                                       
Query: 541 gtgtcttttatagtagcatttttaaagatggtaactggtaacataatttaactcaacctc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgtcttttatagtagcatttttaaagatggtaactggtaacataatttaactcaacctc 800

                                                
Query: 601 tctaaaaggtttatgttgtcatcataggaattttata 637
           |||||||||||| | ||||||||||||||||||||||
Sbjct: 801 tctaaaaggtttgtattgtcatcataggaattttata 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)