Query= MSMg01no089_p08.b1 MSMg01no089_p08.b1 CHROMAT_FILE:
MSMg01no089_p08.b1 PHD_FILE: MSMg01no089_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:57 2005
(437 letters)
>mm_chr16_91733521_91734357
Length = 837
Score = 830 bits (429), Expect = 0.0
Identities = 435/437 (99%)
Strand = Plus / Minus
Query: 1 gcagaggcaagaggatctcgataagactgacgctagcctggtcacaacagcaagacacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gcagaggcaagaggatctcgataagactgacgctagcctggtcacaacagcaagacacat 407
Query: 61 tctctccctctccctgagacagagacagagagaaagagaatgaaaagaaagagaaaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tctctccctctccctgagacagagacagagagaaagagaatgaaaagaaagagaaaacaa 347
Query: 121 actagaaaaatggctcagtggtcctgattcaagtcctagtgtatatatgtggggggcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 actagaaaaatggctcagtggtcctgattcaagtcctagtgtatatatgtggggggcatg 287
Query: 181 gggagtccgtatgtttttaaactgttccttttagtcaaaggctgggaaagaatcattgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gggagtccgtatgtttttaaactgttccttttagtcaaaggctgggaaagaatcattgca 227
Query: 241 agttagaagccagcctggtcaatctagtaagctcctggctagccaaggctagataggact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agttagaagccagcctggtcaatctagtaagctcctggctagccaaggctagataggact 167
Query: 301 ttgaagaagaaagaagagaaggaggaagagaaggaggaaaacagacatgcacagcaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttgaagaagaaagaagagaaggaggaagagaaggaggaaaacagacatgcacagcaagat 107
Query: 361 cccattttttgtaccaaaagctgtacatgaagagccatacgcacacacaaaaatggcctg 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 106 cccattttttgtaccaaaagctgtacatgaagagccataagcacacacaaaaatggcctg 47
Query: 421 gcatatatgcttgggcc 437
| |||||||||||||||
Sbjct: 46 gtatatatgcttgggcc 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_p08.g1 MSMg01no089_p08.g1 CHROMAT_FILE:
MSMg01no089_p08.g1 PHD_FILE: MSMg01no089_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:57 2005
(377 letters)
>mm_chr16_91573271_91574047
Length = 777
Score = 694 bits (359), Expect = 0.0
Identities = 376/389 (96%), Gaps = 12/389 (3%)
Strand = Plus / Plus
Query: 1 agagaaccacctgcctctgccttcaagcactgggattaaaggtgtccaccaccaccacc- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agagaaccacctgcctctgccttcaagcactgggattaaaggtgtccaccaccaccacca 248
Query: 60 -----------accaccacccaacaaacctcacgattttgatcagaggagtacccaagag 108
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 249 ccaccaccactaccaccacccaacaaacctcacgcttttgatcagaggagtacccaagag 308
Query: 109 tacccaggacagcacatagaagacttgggataaacctgtgaggctggcagaaactgtttc 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tacccaggacagcacatagaagacttgggataaacctgtgaggctggcagaaactgtttc 368
Query: 169 ctatgacatgtttaaatctaaaacgattaattacaatgctgtgctggagagacggctcag 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctatgacatgtttaaatctaaaacgattaattacaatgctgtgctggagagacggctcag 428
Query: 229 cagttaagagcactggctgctcttgctgagagctcaggtttggttcgcagagcacacatg 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cagttaagagcactggctgctcttgctgagagctcaggtttggttcgcagagcacacatg 488
Query: 289 gcagctcaccatcatctgtgaccccagttccagggaatctgacactgtcttctggcctct 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gcagctcaccatcatctgtgaccccagttccagggaatctgacactgtcttctggcctct 548
Query: 349 ccttgcactgagtacccgtgtggttccta 377
|||||||||||||||||||||||||||||
Sbjct: 549 ccttgcactgagtacccgtgtggttccta 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
