Query= MSMg01no091_a24.b1 MSMg01no091_a24.b1 CHROMAT_FILE:
MSMg01no091_a24.b1 PHD_FILE: MSMg01no091_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:26 2005
(528 letters)
>mm_chr16_66723814_66724741
Length = 928
Score = 948 bits (490), Expect = 0.0
Identities = 517/528 (97%), Gaps = 4/528 (0%)
Strand = Plus / Minus
Query: 5 gaattcattgagtatgcagagcattggtaaattatcttcaaatctccctgtatgagtgca 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gaattcattgagtagggagagcattggtaaattatcttcaaatctccctgtatgagtgca 803
Query: 65 aagtctctaattctccgctacctgtgtttgtttgatt----tttgtttgtttgtttactt 120
|||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 802 aagtctctaagcctctgctacctgtgtttgtttgatttttgtttgtttgtttgtttactt 743
Query: 121 attcctttacttgtgtggagtaaaatggttgccagatcttcactacaaggagagaaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 attcctttacttgtgtggagtaaaatggttgccagatcttcactacaaggagagaaagga 683
Query: 181 tctgcaaattaattaccagtaaattaatacaaaattatgcaaatatgtcttattagtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tctgcaaattaattaccagtaaattaatacaaaattatgcaaatatgtcttattagtttt 623
Query: 241 ctttccattaagagaatttcaacatcacatagacaaataattttcagctctgaaataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctttccattaagagaatttcaacatcacatagacaaataattttcagctctgaaataata 563
Query: 301 gcttttctgaaaatgcaatcactgtcttgaaagatcttagcaactgcaatcctagccctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcttttctgaaaatgcaatcactgtcttgaaagatcttagcaactgcaatcctagccctt 503
Query: 361 agcacacaatctgatttttctttgatgaagttaaaggtatgcacatgttattaattcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agcacacaatctgatttttctttgatgaagttaaaggtatgcacatgttattaattcagt 443
Query: 421 catgttgcccattaaaaaaagtcatgtaaataaaaattcttctgcttgttttccctttgg 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 442 catgttgcccattaaaaaaagtcatgtaaataaaaattcttctgtttgttttccctttgg 383
Query: 481 agcttatctgtttgctagaaattgtgactgtggcattttacctgttta 528
|| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agtttatctgtttgctagaaattgtgactgtggcattttacctgttta 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_a24.g1 MSMg01no091_a24.g1 CHROMAT_FILE:
MSMg01no091_a24.g1 PHD_FILE: MSMg01no091_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:26 2005
(519 letters)
>mm_chr16_66625633_66626551
Length = 919
Score = 957 bits (495), Expect = 0.0
Identities = 513/519 (98%)
Strand = Plus / Plus
Query: 1 atgccttaaaccagaaagttaaataactataattaaatttttgtagacatatgccatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgccttaaaccagaaagttaaataactataattaaatttttgtagacatatgccatcaa 260
Query: 61 atgttaattctaaattagttggaaatattaagattaagatgggttgagtgacctagccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttaattctaaattagttggaaatattaagattaagatgggttgagtgacctagccaa 320
Query: 121 ccacacaccactgcttagcaatactgtatactgtagagtgctggttagatgctctcagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacacaccactgcttagcaatactgtatactgtagagtgctggttagatgctctcagga 380
Query: 181 tcccatggatggctgggaactgtggctcactgctcacaattagaattacaccagagcact 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccatggatggctgggaactatggctcactgctcacaattagaattacaccagagcact 440
Query: 241 atttcctatgaacagtctgggaaaatataaaaattcagaaaacgacttgtagttttactg 300
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttcctatgaccagtccgggaaaatataaaaattcagaaaacgacttgtagttttactg 500
Query: 301 tatgtgtgtggcttttaaaatactggaaagtcaaaatgctagaaagatattggaaattga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgtgtgtggcttttaaaatactggaaagtcaaaatgctagaaagatattggaaattga 560
Query: 361 gcaggcttgtgctctaaaactttaattcattcatgttttatttaatctgcaagcattgcc 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 gcaggcttgtgctctaaaactttaattcattcatgttttatttaatccgcaagcattgcc 620
Query: 421 tggcatctaccatatgctggcctgtaaaatagatactaggaattaaaatgtcttttctgt 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggcttctaccatatgctggcctgtaaaatagatactaggaattaaaatgtcttttctgt 680
Query: 481 ttatcacaaagttcttttctttcctctgctataggcaga 519
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 ttatcacaaagttcttttctttcctctgttataggcaga 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
