Query= MSMg01no091_l11.b1 MSMg01no091_l11.b1 CHROMAT_FILE:
MSMg01no091_l11.b1 PHD_FILE: MSMg01no091_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:19 2005
(231 letters)
>mm_chr16_45269898_45270530
Length = 633
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 1 aacctggctac-catcttagttacaaa-tattttttttccagctgactctcacccttacc 58
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 aacctggctacacatcttagttacaaaatattttttttccagctgactctcacccttacc 260
Query: 59 cctggaaattaacaggaagaggatccgcctggttgtcttggcccagtctcttggcctctt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggaaattaacaggaagaggatccgcctggttgtcttggcccagtctcttggcctctt 320
Query: 119 ttcctgtcttagtctggtaagcctatattcctggccctggtctcttcccatttatctctt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcctgtcttagtctggtaagcctatattcctggccctggtctcttcccatttatctctt 380
Query: 179 tgccttgcttctgggaggtttcttctaacacttatctctgcctaatttattct 231
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tgccttgcttctgggaggtttcttctaacacttagctctgcctaatttattct 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 633
Length adjustment: 9
Effective length of query: 222
Effective length of database: 624
Effective search space: 138528
Effective search space used: 138528
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_l11.g1 MSMg01no091_l11.g1 CHROMAT_FILE:
MSMg01no091_l11.g1 PHD_FILE: MSMg01no091_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:19 2005
(341 letters)
>mm_chr16_45370680_45371423
Length = 744
Score = 611 bits (316), Expect = e-179
Identities = 334/340 (98%), Gaps = 3/340 (0%)
Strand = Plus / Minus
Query: 5 gaattc-ctaaaacagtctgtac-cacaagtaatgatgagggtgttaacttggactggga 62
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaattcactaaaacagtctgtacacacaagtaatgatgagggtgttaacttggactggga 485
Query: 63 agttttctcaagggccttcatgaagaactgagtatgtaaaaaaaaaaatg-tgacacttt 121
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 484 agttttctcaagggccttcatgaagaactgagtatgtaaaaaaaaaaaagttgacacttt 425
Query: 122 gtaactgtgtcatctgggatagtgtcctacttcattgtcttgtatatcagaccagaatgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtaactgtgtcatctgggatagtgtcctacttcattgtcttgtatatcagaccagaatgt 365
Query: 182 tatattcagctcacgttgtgcagagagctgaaataatattcacacagcattctagcccac 241
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tatattcagctcacgttgtggagagagctgaaataatattcacacagcattctagcccac 305
Query: 242 tgcttacaaacaccactgcagcttctcatgtagtctctgttcatggcgcttctagaactc 301
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 304 tgcttacaaacaccactgcagcttctcatgtagtctctgttcatggggcttctagaactc 245
Query: 302 cccatgtctccattctgtttatcctcctccccaggagctt 341
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cccatgtctccattctgtttatcctcctccccaggagctt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 744
Length adjustment: 9
Effective length of query: 332
Effective length of database: 735
Effective search space: 244020
Effective search space used: 244020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
