Query= MSMg01no095_g05.b1 MSMg01no095_g05.b1 CHROMAT_FILE:
MSMg01no095_g05.b1 PHD_FILE: MSMg01no095_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:23 2005
(503 letters)
>mm_chr16_34381953_34382856
Length = 904
Score = 919 bits (475), Expect = 0.0
Identities = 494/501 (98%), Gaps = 3/501 (0%)
Strand = Plus / Minus
Query: 5 gaattctaagggaccagcctgattagaaaagatgattgacagcagtcatgatgattagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 704 gaattctaagggaccagcctgattagaaaagatgattgacagcagtcatgacgattagaa 645
Query: 65 atgaatagtatgcatctcgctgggcagggatgtgctgtccagaccactgcgttcaactct 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 atgaatagtatgcatct-gctgggcagggatgtgctgtccagaccactgcgttcaactct 586
Query: 125 gcggcaccacaaaccacagtctcacacaccaggcagggagcagtcaaagtggctgcatcc 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gcagcaccacaaaccacagtctcacacaccaggcagggagcagtcaaagtggctgcatcc 526
Query: 185 accaatgggagacaagagaaacaatccctgatgtcagaggtcggaggtactgccataaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 accaatgggagacaagagaaacaatccctgatgtcagaggtcggaggtactgccataaag 466
Query: 245 gggcgggatctgggtagctta--ctctctctctcatgcatccctagtgcaaggtagtgat 302
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 465 gggcgggatctgggtagcttactctctctctctcatgcatccctagtgcaaggtagtgat 406
Query: 303 caggactcactcaagtgtcttcacctgagcctgcccacctgagagctgtccaacagcagc 362
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 caggactcactcacgtgtcttcacctgagcctgcccacctgagagctgtccaacagcagc 346
Query: 363 acgctgtctctgctcaggccactggacactggacagttctccattaagaatgctgtagaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acgctgtctctgctcaggccactggacactggacagttctccattaagaatgctgtagaa 286
Query: 423 ggaattgttccattaagtcagacagaggattgtgtttctaagtctctttcctgtcctcgg 482
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggaattgctccattaagtcagacagaggattgtgtttctaagtctctttcctgtcctcgg 226
Query: 483 ttctaggttgctttgacgttg 503
|||||||||||||||||||||
Sbjct: 225 ttctaggttgctttgacgttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space: 440742
Effective search space used: 440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_g05.g1 MSMg01no095_g05.g1 CHROMAT_FILE:
MSMg01no095_g05.g1 PHD_FILE: MSMg01no095_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:23 2005
(293 letters)
>mm_chr16_34245194_34245886
Length = 693
Score = 513 bits (265), Expect = e-150
Identities = 286/293 (97%)
Strand = Plus / Plus
Query: 1 catcatcccctaaactgaagtttctgttatgccttcttgtgtcgtacccacacccagtga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 catcatcccctaaactgaagtttctgttatgccttcttgtgtcgtacccagagccagtga 260
Query: 61 aggcggcagtctgcgtgtggccatctttctgaggaatggacatggaagtgcccctggttc 120
||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgacactctgcgtgtggccatctttctgaggaatggacatggaagtgcccctggttc 320
Query: 121 ccacacttgcagcatgacccagcagtctgagtgcataccccagagccccaggttagtggt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ccacacttgcagcatgacccagcagtctaagtgcataccccagagccccaggttagtggt 380
Query: 181 tttcatttctctggttctatcccaggtgacaggtaggatcctctttctactgactagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcatttctctggttctatcccaggtgacaggtaggatcctctttctactgactagaca 440
Query: 241 caagttgttctaaagtcatcagaggacaccaggaagtggaagccagcgagagg 293
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 caagttgttctaaagtcatcagaggacaccaggaagtggaatccagcgagagg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
