Query= MSMg01no095_l10.b1 MSMg01no095_l10.b1 CHROMAT_FILE:
MSMg01no095_l10.b1 PHD_FILE: MSMg01no095_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:49 2005
(567 letters)
>mm_chr16_63058080_63059045
Length = 966
Score = 1019 bits (527), Expect = 0.0
Identities = 554/563 (98%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 5 gaattctatcatatccgttatgtaaccaaactacatagagtaaatagaatgctctttgga 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattctatcatatccgttatgtaaccaaactacatagagtaaagagaatgctctttgga 264
Query: 65 agtggaaataatctcgataacagagttaaaggaattcttgtccttgtactataataaatc 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtggaaataatct-gataacagagttaaaggaattcttgtccttgtactataataaatc 323
Query: 125 agttcaaaccttatgcatcagattaatgataatgtaattaactgtgaggaaattttcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agttcaaaccttatgcatcagattaatgataatgtaattaactgtgaggaaattttcaga 383
Query: 185 taatgctgaaattctaattttaacttaaggaacagaggtacgcggctgctgagagaagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatgctgaaattctaattttaacttaaggaacagaggtacgcggctgctgagagaagaa 443
Query: 245 catttccttaattaattcaaagtatggaattaaattgtctgtctaggttctactttttag 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catttccttaattaattcaaggtatggaattaaattgtctgtctaggttctactttttag 503
Query: 305 aactacataaacattaacctccaaatgattagttttatgaactttttgtctcacaaattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 aactacataaacattaacctccaaatgattagttttatgaactttttgtctcaaaaattt 563
Query: 365 atacggaaaatctaataactaattcattaccagtgaaatgggattgaataaatggaccgt 424
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 564 atacgaaaaatctaataactaattcattaccagtgaaatgggattgaataaatggacctt 623
Query: 425 aatggctacaaatgtaaagttttcactatggaagagtcattgcctcttcatcagttagaa 484
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 aatggctacaaatgtaaagttttcactatggaagagtcatcgcctcttcatcagttagaa 683
Query: 485 gaacgaagaccaaagcgtggatacttcattcctccttagaatagggaacaaaacacccat 544
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaatgaagaccaaagtgtggatacttcattcctccttagaatagggaacaaaacacccat 743
Query: 545 ggtaggagttacagagacaaagt 567
|||||||||||||||||||||||
Sbjct: 744 ggtaggagttacagagacaaagt 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space: 532492
Effective search space used: 532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_l10.g1 MSMg01no095_l10.g1 CHROMAT_FILE:
MSMg01no095_l10.g1 PHD_FILE: MSMg01no095_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:49 2005
(285 letters)
>mm_chr16_63138409_63139093
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 ccaacatactgaggaacattcggaacttataggcatttttcacgatttccatgggaaatg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 ccaacatactgaggaacattcggaacttataggcatttttcatgatttccatgggaaatg 265
Query: 61 tcagttgttcccttggcaatctcttactgtgaatgacacctattaatagcagctatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcagttgttcccttggcaatctcttactgtgaatgacacctattaatagcagctatttct 205
Query: 121 actgttttaaattttatgtatgttatttaaaatatataattcttcccttccttttcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 actgttttaaattttatgtatgttatttaaaatatataattcttcccttccttttcctca 145
Query: 181 cttcaaatccttctgtgcttccccatatccctctcaattgatggctgccttttctttatt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ctccaaatccttctgtgcttccccatatccctctcaattgatggctgccttttctttatt 85
Query: 241 tctgtacatgtgtgtgcacgtgaatgtgcatgcatacgtgcatgc 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tctgtacatgtgtgtgcacgtgaatgtgcatgcatacgtgcatgc 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
