TTTATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTTTCACTGCTGTCTCCTAAGCACTGTCTTCTAGTGACATT
CCTTTGAAAGCCTTAACGTTTCCTATCTTACTTTTAGTCACTTTGCACTT
TGCAATGCCAGGAGTCTTTGAAGAGTCTCTTCTGCTTTGCCTTATAGCAT
TCCAGCTGTGTCTGCTTTCTAATACATGAAACTGAAATTTCTGCCAGGTG
GACAACATGAAGATGTGACTGCTACCTTCACATCAACAACTCTGGAAAAT
AGAGGAATCTTTCATTGCCTTTTGTTAGCAGTGCCCCCCAAATTGTGTTA
TTCTCATCATTTGTATCAGAAGGTTCACAATAGCATCTTGTTTCTACAGC
AGTGGTTTTTCCTTTGAGTCTTTAAGTCTGGAAGCAAAGGACAAGGGAGT
GCAAAAGTTTTTATTTTTTCCTGTTAGAGGATTTGGGGGGGGTGGTGAGT
ACTTACTATATTTTCTTCCTTCTCTCCTCTTTCTTTTTTCCCCTCCTTCT
ATACATCTTTTATTCACCCTTATTCCCCCACTCCATTTTTTTCTTATTTC
CATTTCTCCTCCCTTTCTTTCTCCTTCTCAACCTTCTACCAACTTTCCTC
CTTCCTACTCTACCTCCTCATCCCTACCTTCCTCCTCTATTTCATTTTTT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTG
AAAAGCACCTGAAAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCA
AATCAAAACAGCCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACATTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACGACTCTGGAA
ATCAGTCTTGTGGTTCCTCAGAAAATTGGACATAGTATTACTGAAGGATC
CCAAAATACCTCTTCTGGGCATATATCCAGAAGATGTTCCAACTGGTAAG
AAAGATGCATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATTTACACAATGGAGTACTGCTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGGCAAATGGAGGGTATCATCCTGAGTGAGGTAACC
CAATCACAAAGGAACTCAAATGATATGTACTCACTGATAAGTGGATATTA
GCCCAGAAACTTAGAATACCCAAGATACAAGGTACAATATGCCAAACACA
TGAGACTCA

Query= MSMg01no096_e02.b1 MSMg01no096_e02.b1 CHROMAT_FILE:
MSMg01no096_e02.b1 PHD_FILE: MSMg01no096_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:32 2005
         (451 letters)



>mm_chr16_77793064_77793914
          Length = 851

 Score =  839 bits (434), Expect = 0.0
 Identities = 445/450 (98%), Gaps = 3/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttttcactgctgtctcctaagcactgtcttctagtgacattcctttgaaagcc 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaattctttttcactgttgtctcctaagcactgtcttctagtgacattcctttgaaagcc 590

                                                                       
Query: 65  ttaacgtttcctatcttacttttagtcactttgcactttgcaatgccaggagtctttgaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttaacgtttcctatcttacttttagtcactttgcactttgcaatgccaggagtctttgaa 530

                                                                       
Query: 125 gagtctcttctgctttgccttatagcattccagctgtgtctgctttctaatacatgaaac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gagtctcttctgctttgccttatagcattccagctgtgtctgctttctaatacatgaaac 470

                                                                       
Query: 185 tgaaatttctgccaggtggacaacatgaagatgtgactgctaccttcacatcaacaactc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgaaatttctgccaggtggacaacatgaagatgtgactgctaccttcacatcaacaactc 410

                                                                       
Query: 245 tggaaaatagaggaatctttcattgccttttgttagcagtgccccccaaattgtgttatt 304
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 409 tggaaaatagaggaatctttcattgccttttgttagcagtaccccccaaattgtgttatt 350

                                                                       
Query: 305 ctcatcatttgtatcagaaggttcacaatagcatcttgtttctacagcagtggtttttcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctcatcatttgtatcagaaggttcacaatagcatcttgtttctacagcagtggtttttcc 290

                                                                       
Query: 365 tttgagtctttaagtctggaagcaaaggacaagggagtgcaaaagtttttattttttcct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tttgagtctttaagtctggaagcaaaggacaagggagtgcaaaagtttttattttttcct 230

                                         
Query: 425 gttagaggattt---ggggggggtggtgag 451
           ||||||||||||   |||||||||||||||
Sbjct: 229 gttagaggattttggggggggggtggtgag 200


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space:   370881
Effective search space used:   370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)