Query= MSMg01no096_k04.b1 MSMg01no096_k04.b1 CHROMAT_FILE:
MSMg01no096_k04.b1 PHD_FILE: MSMg01no096_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:03 2005
(342 letters)
>mm_chr16_53690189_53690932
Length = 744
Score = 609 bits (315), Expect = e-179
Identities = 336/343 (97%), Gaps = 2/343 (0%)
Strand = Plus / Minus
Query: 2 gaattcttcataattc-ccacctttttatatgtttaaaaatcaataaggctttattcagc 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaattcttcataattcaacacctttttatatgtttaaaaatcaataaggctttattcagc 485
Query: 61 caaattgcataatctctcttgtacttctccagcaaatcacaaaccacaggcaagttagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caaattgcataatctctcttgtacttctccagcaaatcacaaaccacaggcaagttagtc 425
Query: 121 atcttggattttgaaaagtgtgaaactaaaaacagagaaaacaaaatgctgtttatagaa 180
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 424 atcttggattttgaaaagtgtgaaagtaaaaacagagaaaagaaaatgctgtttatagaa 365
Query: 181 ctaaacactaagttcattagttttctgtaaattttttagaatgatactgata-tttttat 239
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 364 ctaaacactaagtccattagttttctgtaaattttttagaatgatactgatattttttat 305
Query: 240 ttacatgtcataattgacaatacaaaattttataattcaagaagaatttaattcaatcta 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 ttacatgtcataattgacaatacaaaattttataattcaagaagaatttaattcaaacta 245
Query: 300 atacaacaatggaaaatatttgataagataataaaatagaaaa 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atacaacaatggaaaatatttgataagataataaaatagaaaa 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 744
Length adjustment: 9
Effective length of query: 333
Effective length of database: 735
Effective search space: 244755
Effective search space used: 244755
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_k04.g1 MSMg01no096_k04.g1 CHROMAT_FILE:
MSMg01no096_k04.g1 PHD_FILE: MSMg01no096_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:03 2005
(335 letters)
>mm_chr16_53515392_53516126
Length = 735
Score = 594 bits (307), Expect = e-174
Identities = 328/335 (97%)
Strand = Plus / Plus
Query: 1 caaaggcacttgtaccaatttcttcattcatacaatcaggaaaacattcagaatatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaggcacttgtaccaatttcttcattcatacaatcaggaaaacattcagaatatcatt 260
Query: 61 ttttttaatttttcattattgtgactatgtacataatcatgatgtgtgttgctgaggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ttttttaatttttcattattgtgactatgtacataatcatgatgtgtgttggggaggcct 320
Query: 121 acatgccccagtgcaatgcactcaggtcacatgataactgtgttaactttgctctatcct 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgccccagtgcaatgcacggaggtcacatgataactgtgttaactttgctctatcct 380
Query: 181 gccacttttcaaaccttgtcttacatcttgaactcagaaaaattattgactttacataga 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gccactttttaaaccttgtcttacatcttgaactcagaaaaattattgactttagataga 440
Query: 241 ttttacccagtgggtcattttgctggcccagagatatattttgtatagttatttataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttacccagtgggtcattttgctggcccagagatatattttgtatagttatttataata 500
Query: 301 tatttgatatatgttatttacaagtttctcctggt 335
|||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttgatatatgttatttacaagtttctcctggt 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
