Query= MSMg01no096_o15.b1 MSMg01no096_o15.b1 CHROMAT_FILE:
MSMg01no096_o15.b1 PHD_FILE: MSMg01no096_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:27 2005
(526 letters)
>mm_chr16_80087449_80088374
Length = 926
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%)
Strand = Plus / Minus
Query: 1 acggtaaatgtatatattcatagttatgggtggatatattagttagttaaatgcttagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 acggtaaatgtatatattcatagttatgggtggatatattagttagttaaatgcttagca 667
Query: 61 gagcctttagaattcaaccattgaataagtaacctgataattttccagaggaagacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gagcctttagaattcaaccattgaataagtaacctgataattttccagaggaagacctgg 607
Query: 121 aggtctgagctgtaggcccaatccaaggccagatattgaacaaccacaaaagtaaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aggtctgagctgtaggcccaatccaaggccagatattgaacaaccacaaaagtaaatatt 547
Query: 181 tcaaaccatgcctttttgatatgaagttcatctgtctttcaacatcatcacaatatcccc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 546 tcaaaccatgcctttttgatatgaagttcatctgtctttcaacatcatcacaatctcccc 487
Query: 241 tgaagctttccatattgtcttgtttagtaagaaatacaatttacaaaatcaatgatgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgaagctttccatattgtcttgtttagtaagaaatacaatttacaaaatcaatgatgtat 427
Query: 301 gtacctgtattatgaagagaattgttcttttatgcatcttcagcgaaatgaatagtttga 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 426 gtacatgtattatgaagagaattgttcttttatgcatcttcagcgaaatgaataggttga 367
Query: 361 tatattggacaatgcagtctatgtactgttatgaaatactcagcgctctgatacatttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tatattggacaatgcagtctatgtactgttatgaaatactcagcgctctgatacatttga 307
Query: 421 ttcaacaatttatttctcaattcaggttgttatttgttctgaacaaatcatacagggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttcaacaatttatttctcaattcaggttgttatttgttctgaacaaatcatacagggtga 247
Query: 481 ttgtattatcgcactcggatctaggttagtaattgactgctgctgt 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgtattatcgcactcggatctaggttagtaattgactgctgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_o15.g1 MSMg01no096_o15.g1 CHROMAT_FILE:
MSMg01no096_o15.g1 PHD_FILE: MSMg01no096_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:27 2005
(593 letters)
>mm_chr16_79992271_79993264
Length = 994
Score = 1125 bits (582), Expect = 0.0
Identities = 591/594 (99%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 1 atccttgtacattagaagcaagttactatatttcaaagcttcacaata-attcagctttt 59
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 atccttgtacattagaagcaagttactatatttcaaagcttcacaatacattcagctttt 260
Query: 60 gtcaaaacagaggacccagagaacaggattaaagttccttccctttcttcaagcctcact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaaaacagaggacccagagaacaggattaaagttccttccctttcttcaagcctcact 320
Query: 120 tttctcagggagaatatgtcctgcataatttatcttattaccctttttcatatattccct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctcagggagaatatgtcctgcataatttatcttattaccctttttcatatattccct 380
Query: 180 tgcctctactagatcccacattaacctttagactaataaaatagaatgaattgaccatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctctactagatcccacattaacctttagactaataaaatagaatgaattgaccatat 440
Query: 240 ggttttaaaccaatattggtccatactatgggaccttttcttcatttcaaagtaatcaaa 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttttaaaccaatattgatccatactatgggaccttttcttcatttcaaagtaatcaaa 500
Query: 300 tatgaccatgataagacagtaaatgtaattaaaattactgggaaataaacctaataactc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgaccatgataagacagtaaatgtaattaaaattactgggaaataaacctaataactc 560
Query: 360 caatgaaaatattattaaatcaaaattaacacatacaaaatacataccgaaattgtaagc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 caatgaaaatattattaaatcaaaattaacacatacaaaatacataccgaaaatgtaagc 620
Query: 420 atttctttaaaataatacatatacaccctttatgagactcaatataagtttattaaattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttctttaaaataatacatatacaccctttatgagactcaatataagtttattaaattt 680
Query: 480 gatttatgtatagtcacacctcaaatctggtagtctgggactcacctcaacatcactcca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatttatgtatagtcacacctcaaatctggtagtctgggactcacctcaacatcactcca 740
Query: 540 gagctgaaacactcaatcaaggattttcagattatcttgcaaaattcttcttca 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagctgaaacactcaatcaaggattttcagattatcttgcaaaattcttcttca 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 994
Length adjustment: 10
Effective length of query: 583
Effective length of database: 984
Effective search space: 573672
Effective search space used: 573672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
