Query= MSMg01no097_e05.b1 MSMg01no097_e05.b1 CHROMAT_FILE:
MSMg01no097_e05.b1 PHD_FILE: MSMg01no097_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:56 2005
(231 letters)
>mm_chr16_29909864_29910499
Length = 636
Score = 385 bits (199), Expect = e-111
Identities = 225/235 (95%), Gaps = 5/235 (2%)
Strand = Plus / Minus
Query: 2 aactgcttc-ccttcttga-agactttctgcaaaggcgtccacagaacaccagtccctgt 59
||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 436 aactgcttcaccttcttgacagactttctgcaaaggcgtgaagagaacaccagtccctgt 377
Query: 60 cccccaggaagggcca---tgtctgtgacccttccaaacatctcctgcagtggcagcatt 116
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cccccaggaagggccaccgtgtctgtgacccttccaaacatctcctgcagtggcagcatt 317
Query: 117 tctgagcccctgggcgtgagaacttgggctctgctctggctggttggttgctgagtcttt 176
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 316 tctgagcccctgggcgtgagaacttgggctctgctctggctggttggttgttgagtcttt 257
Query: 177 gctgtcattctttctcagctttcagcctccttctggaacagtcactttcttgctg 231
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 256 gctgtcattctttctcagctttcagtctccttctggaacagtcactttcttgctg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 636
Length adjustment: 9
Effective length of query: 222
Effective length of database: 627
Effective search space: 139194
Effective search space used: 139194
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_e05.g1 MSMg01no097_e05.g1 CHROMAT_FILE:
MSMg01no097_e05.g1 PHD_FILE: MSMg01no097_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:56 2005
(190 letters)
>mm_chr16_29797213_29797802
Length = 590
Score = 344 bits (178), Expect = 2e-99
Identities = 187/190 (98%)
Strand = Plus / Plus
Query: 1 attcctgtcccttcatgacacgccagccagtgtcctgactccgagaccccagatagtagg 60
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 attcctgtcccttcatgaaacgccagccagtgtcctgactctgagaccccagatagtagg 260
Query: 61 actaggatttcttcctcatttatgttttctaaaaggtttttgagcaaccctcacaccccc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 actaggatttcttcctcatttatgttttctaaaaggtttttgagcagccctcacaccccc 320
Query: 121 tctgaatcattctctattccatctgctcctcttctggccttgtttgtggggccacacacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgaatcattctctattccatctgctcctcttctggccttgtttgtggggccacacacc 380
Query: 181 ggtgggtcag 190
||||||||||
Sbjct: 381 ggtgggtcag 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
