Query= MSMg01no097_n08.b1 MSMg01no097_n08.b1 CHROMAT_FILE:
MSMg01no097_n08.b1 PHD_FILE: MSMg01no097_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:43 2005
(446 letters)
>mm_chr16_30836969_30837811
Length = 843
Score = 820 bits (424), Expect = 0.0
Identities = 440/446 (98%), Gaps = 3/446 (0%)
Strand = Plus / Plus
Query: 1 gtggttaaaagcactgactgatcttccagaggtcctgagttcaatggctcacaaccattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtggttaaaagcactgactgatcttccagaggtcctgagttcaatggctcacaaccattc 260
Query: 61 ttagtgggacttaatgccctcttctggtgtgtctaatatatatataacccttaaaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ttagtgggacttaatgccctcttctggtgtgtctaatatatatataatccttaaaaaaat 320
Query: 121 ttagcatcaactgcttaatacctttctcccttcagagctgtaaattttctagccatctca 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagcatcaactgcttaatacctttttcccttcagagctgtaaattttctagccatctca 380
Query: 181 ccagaaacctcacaagaaaatatgtactaaccccactgtgtaatcaaaatttaccttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagaaacctcacaagaaaatatgtactaaccccactgtgtaatcaaaatttaccttatc 440
Query: 241 aaattataattccactccaggcatcttcagagccccctcaatttgtcaaaagataaaaaa 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattataattccaccccaggcatcttcagagccccctcaatttgtcaaaagataaaaaa 500
Query: 301 gggatttcttagaactttttttgagatgaaacttgagagtaacaaaaatagtatgtatat 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggatttcttagaactttttt-gagatgaaacttgagagtaacaaaaatagtatgtatat 559
Query: 361 atatatatattgcgaagccagttaattaaggctctcctttgagaagcccattgctgctcc 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atatatat--tgcgaagccagttaattaaggctctcctttgagaagcccattgctgctcc 617
Query: 421 tgggtgtctctcactttcccctgctg 446
||||||||||||||||||||||||||
Sbjct: 618 tgggtgtctctcactttcccctgctg 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 843
Length adjustment: 10
Effective length of query: 436
Effective length of database: 833
Effective search space: 363188
Effective search space used: 363188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_n08.g1 MSMg01no097_n08.g1 CHROMAT_FILE:
MSMg01no097_n08.g1 PHD_FILE: MSMg01no097_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:43 2005
(450 letters)
>mm_chr16_30992579_30993428
Length = 850
Score = 294 bits (152), Expect = 8e-84
Identities = 164/168 (97%)
Strand = Plus / Minus
Query: 283 gggcctttaaaatggtagacatttacctgtgataactgtctgctgcagagttgcttaaac 342
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 664 gggcctttaaaacagtagacatttacctgtgattactgtctgctgcagagttgcttaaac 605
Query: 343 atgaaatgcttaaaatgctagaggtggaacaactgatcttcatggtgtagatgtgtttta 402
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 604 atgaaatgcttaaaatgctagaggtggaacaactgatcttcatggtatagatgtgtttta 545
Query: 403 gagcccactaggtgctgccacttaagacatgctctctttactaatggc 450
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gagcccactaggtgctgccacttaagacatgctctctttactaatggc 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
