Query= MSMg01no098_n18.b1 MSMg01no098_n18.b1 CHROMAT_FILE:
MSMg01no098_n18.b1 PHD_FILE: MSMg01no098_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:06 2005
(362 letters)
>mm_chr16_76901226_76901986
Length = 761
Score = 611 bits (316), Expect = e-179
Identities = 346/356 (97%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 7 gaattctcttcctccgcctcctccttactcttctgctttgaagcagtgaagtaatggaag 66
||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 498 gaattctcttcctttgcctcctctttactcttctgctttgaagcagtgaagtagtggaag 439
Query: 67 aggctgacaggcacgtgtgcaaaaggagaggagagtctaattagaattgctttcataaat 126
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aggctgacaggca-gtgtgcaaaaggagaggagagtctaattagaattgctttcataaat 380
Query: 127 agtagttcatctctttagcggtttaaaggtgagaaaccagcactggacttcaaaggcagt 186
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 379 agtagttcatctctttagcggtttaaaggtgagacgccagcactggacttcaaaggcagt 320
Query: 187 gtgcctctaaaaacggtctgaaccgtggcttctctctaacgggggaagcttcctggaagg 246
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtgcctctaaaaacggtctgaacggtggcttctctctaacgggggaagcttcctggaagg 260
Query: 247 aagacgtcatctgctttcctgggtgccgcattgaaggggaagaaagttaagcatcatgac 306
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 259 aagatgtcatctgctttcctgggtgccgcattgaaggagaagaaagttaagcatcatgac 200
Query: 307 ttctgttagtttcactgtgtccctgtttagtttctgtttccatgatctgtccattg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttctgttagtttcactgtgtccctgtttagtttctgtttccatgatctgtccattg 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 761
Length adjustment: 9
Effective length of query: 353
Effective length of database: 752
Effective search space: 265456
Effective search space used: 265456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_n18.g1 MSMg01no098_n18.g1 CHROMAT_FILE:
MSMg01no098_n18.g1 PHD_FILE: MSMg01no098_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:06 2005
(457 letters)
>mm_chr16_76768308_76769164
Length = 857
Score = 803 bits (415), Expect = 0.0
Identities = 443/457 (96%), Gaps = 8/457 (1%)
Strand = Plus / Plus
Query: 1 cactctttgtaagctttaaatgaagaaatgttaatggcggcaacgctcttgatggagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactctttgtaagctttaaatgaagaaatgttaatggcggcaacgctcttgatggagacc 260
Query: 61 cgggcatagtttcaagacttaccctggctctggcaacattggccacctcttagatgaagg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgggcacagtttcaagacttaccctggctctggcaacattggccacctcttagatgaagg 320
Query: 121 ggcaagagaacgagggaacattaccggaacaccgttagaagtgtgatggagacaagagtt 180
||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ggc--------gagggaacattaccggaacaccgttagaagtgtgatggagaaaagagtt 372
Query: 181 tccaggtgcagctttggaggtttaaagcagccacacaagatgcagagctaacacagggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tccaggtgcagctttggaggtttaaagcagccacacaagatgcagagctaacacagggga 432
Query: 241 ggaacagaaaattcttatcatggcttcttgtgccttcagttcatcgatcatctgccagtt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggaacagaaaattcatatcatggcttcttgtgccttcagttcatcgatcatctgccagtt 492
Query: 301 tatcccaggggccacaagtaatcagtaacctgctagcaggtccaggattgcagaggcttc 360
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 493 tatcccaggggccacaagtaatcagtaacctgctagcaggtttaggattgcagaggcttc 552
Query: 361 ctgaggtacagaacagagaagatgccacctctgagggagaatttggagtggagagaaagg 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctgaggcacagaacagagaagatgccacctctgagggagaatttggagtggagagaaagg 612
Query: 421 catacccaacatcaaacttcctctttgattaaggagt 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 613 catacccaacatcaaacttcctctttgattaaggagt 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
